Amaranthus tricolor (tampala): 130806363
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Entry
130806363 CDS
T09367
Name
(RefSeq) DNA polymerase kappa isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130806363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atri03400
]
130806363
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130806363
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
130806363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
DUF4352
Motif
Other DBs
NCBI-GeneID:
130806363
NCBI-ProteinID:
XP_057527384
LinkDB
All DBs
Position
2:33673355..33689511
Genome browser
AA seq
706 aa
AA seq
DB search
MEETATKTEPSSSEAPISKPWQSYHTVYTNAKAGMDGVDKEKVQKVVYEMSKGSKYFENE
ERKKALMCQKIENMRERRKKLSTADISYYQKVAERRITELEAQRDLSRIWLHVDMDAFYA
AVETLSNPSLKGKPMAVGSLSMLSTANYEARKYGVRAAMPGFIARKLCPELIFVPVDFEK
YTYYSTLTRKVFQRYDPNFISASLDEAYLDITEVCRERDLKSDDVAEEIRRRVFEETGLT
CSAGVGPNRLLAKVCSDINKPNGQFILPNDRMAVITFISSLPIQKIGGIGKVTEHILRNA
FEINTCKDLLEKGSLLCALFSPSSADFFLSVGLGLGSTDAPQARLRKSMSNERTFSATND
ETFLYKKLAELAETLATDLEKEGLCGRNLTLKLKTAHFEVRTRAVTLQKYICSSEDILMH
GKKLLKAELPASLRLIASFQSIMVIMQFLGLRISQFSEDKAGPSDPKQKSITNFVIVGDT
SGAIMRNSDYSRLMEKENSFSNDFREDFSASDLSITYDPSSICAHNDAFNSDQFSDFCCI
DVNINNIDRKNVPLNSIQAEQSARPGGHISEAHEPVSLQLESRVGRSNTNLDELTGCTNN
RNDDAVPSVSLQAQFQWVDEYKCSICGIELPLEFVDERQEHFDFHLAERLQEECSSSSSM
SHFSEKRYIQKDQIVSQSRNKKRKSLPEKGKYVSIDQFFTKRNQNT
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacagcgacgaagactgagccatcttcaagcgaagctccaatttcaaaacca
tggcaatcttatcacactgtttacaccaacgccaaagctggtatggatggagttgacaag
gaaaaagtacagaaagtagtttatgaaatgagcaaagggtcaaagtattttgaaaacgag
gaacgcaaaaaggccctcatgtgtcagaagattgagaacatgcgtgaaaggcgtaaaaaa
ctttcgactgctgatatatcttactatcagaaggttgctgaaagaagaataacagaacta
gaagcccaacgtgacttgtcaaggatttggcttcacgtagatatggatgccttttatgct
gctgttgagacattgagcaatccttcactgaagggcaaaccgatggctgttggcagcttg
tctatgctatctactgcaaattatgaggcacgtaaatatggtgttcgtgctgcaatgccc
ggatttattgcacgtaaattgtgcccagagcttatttttgttccagtagattttgagaag
tacacttactacagtactttaactagaaaagtctttcagcgatatgaccctaatttcatt
tccgccagtttagatgaagcataccttgatataactgaggtttgcagagaaagagacttg
aaaagtgatgatgttgctgaggagattcgaagaagggtttttgaagagaccggtttaaca
tgtagtgctggtgtgggtcctaatcggttactggctaaggtatgctcagatataaacaag
ccaaatggacaatttattttgccaaatgatagaatggctgtcattacattcatatcctcc
ctcccaatacagaagattggaggcattggcaaggttactgagcatatcctaaggaacgct
tttgaaataaatacatgcaaggatttgcttgagaaaggaagtttgctttgtgcattgttt
tctccttcatctgcagatttttttctctctgttggattggggctagggagcacagatgct
ccacaggccaggctacggaagagcatgagtaacgagagaacattttcggcgaccaatgat
gaaactttcttgtataagaaactagcggaacttgctgagacgcttgcaactgacttggaa
aaggaaggactttgtggtcgtaatctgacacttaaactgaaaactgcgcattttgaggtt
cgaactagagcagtaacattgcagaagtatatatgttcaagtgaggatatactgatgcat
ggcaagaaattgctgaaagcagaacttcctgcatcactaagactaatagcaagttttcag
agcattatggtcatcatgcaatttctcggccttcgtatatctcagtttagtgaagataaa
gctggtccatctgatcccaagcagaaatctattaccaattttgtcattgtaggagatact
tccggagctattatgcgtaacagtgactattcgaggttgatggaaaaggaaaattctttt
tcgaatgattttcgagaggatttttccgctagtgacctcagtattacttatgatcccagt
tctatatgtgcccataatgatgcattcaacagtgatcaattctcagatttttgctgtata
gatgtaaacattaacaatatagaccggaaaaatgtgcctctgaacagtattcaagcagaa
cagagtgctaggcctggtggtcatatttcagaggcacatgaacctgtttctttgcaattg
gagtcaagagttggtcgcagtaatacaaatctcgatgaattgactggatgcaccaataat
agaaatgatgatgctgtcccttcagtaagtctgcaagcacaattccaatgggtggacgag
tacaaatgttctatttgcggaatagaattgcctctcgaatttgttgacgagagacaagaa
cactttgattttcatctagctgaaagattgcaggaagagtgctctagtagtagctcaatg
agtcacttctctgaaaaaaggtatattcagaaagaccagattgtgagccaaagtagaaat
aaaaagcgcaagtcattgccagaaaaaggcaaatatgtttctatagatcagttctttaca
aagaggaatcagaatacctag
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