Amaranthus tricolor (tampala): 130814943
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Entry
130814943 CDS
T09367
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00906
Carotenoid biosynthesis
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
130814943
Enzymes [BR:
atri01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
130814943
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
GIDA
FAD_oxidored
Pyr_redox_3
Thi4
GKRP_SIS_N
Motif
Other DBs
NCBI-GeneID:
130814943
NCBI-ProteinID:
XP_057537222
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Position
6:23448766..23457885
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AA seq
543 aa
AA seq
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MVDYCLGASKFATMAVSSPLSHFRLPHKSIKLHRNFQAVCFWRPSCPYVVDCSTGSGLSG
NSKWKIANSDSSCVATKEHFANEEDFIKAGGSELVYVQMQQNKDMDNHSKIGDKLPQISG
GDELLDMVVIGCGPAGLALAAESAKLGLKVGLVGPDLPFTNNYGVWEDEFKALGLEGCIE
QVWRDTIVYIDDDNPISIGRSYGRVSRHLLHEELVKRCLESGVSYLNAKVDRIMEGFDGH
SLVACERDFTISCRLVTVASGAASGKLLEYEVGGPRVCVQTAYGVEVEVESSPYDPNVMV
FMDYRDYTKQSFQSLEAKYATFLYAMPITPTRIFFEETCLASVDAMPFDLLKKKLIERLQ
TMGVRIIKTYEEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPKYAS
AIANIIKSKNAFLRQGNENISIEAWNTLWPQERKRQRAFFLFGLALLVQLDIEGIRTFFR
TFFRVPKWMWEGFLGSNLSSVDLIWFAFYMFVIAPNDLRMSLIRHLLSDPTGATMIRTYM
TLI
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggtggattactgtctcggagcttcgaaattcgctacaatggcggtttcatcacctcta
agtcactttcgtttgccgcataagagcatcaaactacaccgaaatttccaggcggtttgc
ttttggagaccgagttgtccatacgttgtagattgtagtactggtagtggactgagtgga
aatagtaagtggaagattgcgaatagtgatagtagttgtgtagctactaaagaacatttt
gctaatgaggaagattttattaaagctggaggttctgagcttgtgtatgttcaaatgcaa
caaaacaaggatatggataatcattccaaaattggtgataagttgcctcaaatatcaggt
ggagatgaattgctggatatggtagtaattggttgtggtccagctggtctagctttggca
gcagaatctgctaaattaggattaaaagttggcctggttggtcctgatcttccctttact
aataactacggcgtttgggaagatgaatttaaagcattgggacttgaaggttgtattgag
caggtttggcgtgataccattgtatatattgatgatgataatcctatttctattggtcga
tcttatggaagagttagcaggcatttacttcatgaggaactggtgaaaaggtgtttggag
tcaggtgtctcttatctgaacgcaaaagttgatcgaattatggaaggttttgatggacat
agtcttgttgcttgtgaacgtgatttcacaatctcgtgcaggcttgtaacagttgcatct
ggagcagcttcaggaaaactccttgagtatgaagtaggtggtccaagggtttgtgttcaa
acagcctacggtgtggaggtggaggtggaaagcagtccttatgatccaaacgttatggtg
ttcatggactacagggattacactaaacaaagctttcaatctctggaggcaaagtatgca
acgttcttgtatgcaatgccaataacaccaaccagaattttctttgaggagacttgtttg
gcttctgtagatgccatgcccttcgatttgctcaagaaaaaactcattgaaagattacaa
actatgggtgttcgtatcattaaaacatatgaagaggagtggtcttatatacctgttggt
ggatccttacctaatacagagcaaaggaaccttgcgtttggggctgctgctagcatggtg
catccagccacaggatattcagttgtgagatcattgtcagaggctccaaagtatgcttcg
gcaattgcaaatataatcaagtcaaaaaatgcatttttgcgtcaagggaatgagaacatt
tcaattgaagcctggaatactctttggcctcaagaaaggaaacgtcaaagagcctttttc
ctgtttggacttgcacttttagtccagcttgatattgagggtatcagaacatttttccgc
acatttttccgagttccaaaatggatgtgggagggattccttggttcaaatctgtcttcc
gttgatctcatatggtttgccttttacatgttcgttattgctccaaatgatttgaggatg
agccttataaggcatctactatctgatcctacaggagcaactatgataagaacatatatg
actttaatatga
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