Amaranthus tricolor (tampala): 130817811
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Entry
130817811 CDS
T09367
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04075
Plant hormone signal transduction
atri04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130817811
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
130817811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atri03000
]
130817811
Transcription factors [BR:
atri03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
130817811
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
130817811
NCBI-ProteinID:
XP_057539701
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All DBs
Position
7:15648572..15653498
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AA seq
675 aa
AA seq
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MPLTELIRMLKGKPEVSQGASTSIYPSSRPDSDCVELVWENGQIMMQGKARKNPISNNFQ
TFGSKPLDDRVSNTSKMTKFGQMNSEMAEFPLCVPSCEVGLDQDVPWLSYPMDEPLHNDY
TPDFLNELSGVTINDLPSDSPLACREKITSFHGDGGHDASINLKHSHTSKPPSSNVKDNR
GAVGEVPQFLPPFQHSVPRSGISDGNNLGNAQKAASRDSVPNPSTLSAFASLRLHKLNAG
QPSTSSGFTKFPKFSRPASLSRASHVTVNPSTILENDDKRCALSSNNPAKSTLFNSQKEI
VSHNQTNVEPANTNAESFPTKPNQELISTKETLYRENMAINHMSPNQACDTSINKAGTGG
DDRIVEPVVAASSVCSGNSVDRASNEPSPTLKRKCLEAADSSSHSDENEDESLGARKPVC
GQTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQL
QVQILSMGPGLYMQPMMFPPGMQPIHGAHMPHFSPMGLGMGMGMGFGMNMLNMNSGARMV
PFLGPHYPIPGTRPPFHGMPGSTLQAFPHPGQGFPISMQQPFVPPLAGNFMKMPSGSNAS
GVAGTPNAPHLASSGCAKDANLQLIPSGITSNNVSSSSNQATNQVSNERTQQSATNIDQA
QDVKPSEAANKENTA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaactgagcttattaggatgcttaaagggaaaccagaagtttcccaaggtgca
tccacttccatttatccttcttctagaccagattctgattgtgttgagctggtttgggaa
aatggtcagattatgatgcaaggtaaagctagaaaaaatcccatttcaaacaattttcaa
acatttggctccaagcccctagatgatagggtgtctaatacttcaaaaatgaccaagttt
gggcaaatgaattctgaaatggctgaatttcctttgtgtgttccttcttgtgaagtgggt
ttggatcaagatgtaccctggttgagttaccccatggatgaacctttgcataatgactat
actcctgacttcttgaatgaattatcaggagttaccattaatgatcttccctcagacagc
cctttagcttgccgtgaaaagataactagttttcatggtgatggtggccatgatgcctcc
ataaatttaaaacatagccatacttctaaacccccttcaagtaatgtgaaggataataga
ggtgcagttggtgaggtaccccaatttttgcctccatttcagcacagtgttccaagatca
ggtatctctgatggcaacaatttaggaaatgcccaaaaagctgcttcaagagactctgta
cctaatccatctacattaagtgcctttgccagcttgagattgcataagttaaatgctgga
caacctagtactagttcgggctttacaaaattccctaaattctcgcggcctgcttctctt
tcgagagctagtcatgtgacggtaaacccctcgacaatactagagaatgatgataaaaga
tgcgctttgagtagtaataatcctgctaaatctactctatttaattcacagaaagaaata
gtttctcataaccaaaccaatgtagaaccagcaaatactaatgcagaatcttttcccaca
aagcctaatcaggagctgatttctactaaagaaactttgtatagagaaaacatggctata
aatcacatgtcaccaaatcaggcatgtgatacatcaataaacaaagcgggtactggtggc
gatgacaggattgtggagcctgttgttgccgcatcttctgtatgttcgggtaatagtgtt
gaccgagcttcaaatgagccgtcacctactttgaaaagaaaatgtcttgaagctgcagat
tcatcaagtcatagtgatgaaaatgaagatgaatcattgggtgcaaggaaacctgtttgt
ggtcagactggctcaaagagaagcagagctgcagaagtccataatctatctgagaggaga
cgaagggacagaattaacgagaagatgcgtgcattacaagagctcatacccaattgcaat
aaggctgacaaagcttcgatgcttgatgaggccatagagtatttgaagacactccaactt
caagtacagatattgtcaatgggtcctgggttgtatatgcagccgatgatgttcccgcca
ggaatgcaaccgatccatggagcacatatgccgcatttctcaccgatggggcttggcatg
ggcatgggaatgggatttggaatgaatatgctcaatatgaatagtggtgcaaggatggta
ccattccttggccctcattaccctatccctggaaccaggcccccgtttcatggaatgcca
ggttctacccttcaagctttcccgcatcccggtcaaggatttcctatctctatgcaacaa
ccctttgttcctccgctggcaggaaattttatgaagatgccatcaggatcaaacgcctca
ggtgtagctgggacacccaatgcaccgcatttagcttcatctggttgtgcaaaggatgct
aacctgcaactaataccaagtggcatcactagtaacaacgttagcagctcctcgaatcag
gcaaccaatcaggtatcaaatgaaagaactcaacagtctgccacgaacatagatcaagcg
caagatgtaaaaccgtcagaagctgctaacaaagaaaacactgcatag
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