Amaranthus tricolor (tampala): 130820232
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Entry
130820232 CDS
T09367
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00062
Fatty acid elongation
atri01040
Biosynthesis of unsaturated fatty acids
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
atri01212
Fatty acid metabolism
Module
atri_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
130820232
01040 Biosynthesis of unsaturated fatty acids
130820232
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atri01004
]
130820232
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
130820232
Lipid biosynthesis proteins [BR:
atri01004
]
Fatty acid synthase
Component type
130820232
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Gene cluster
GFIT
Motif
Pfam:
PTPLA
Motif
Other DBs
NCBI-GeneID:
130820232
NCBI-ProteinID:
XP_057541506
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Position
8:complement(19839462..19843871)
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AA seq
221 aa
AA seq
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MAGFFSFLRRVYLSIYNWTVCFGWAQVLYFAVKTLRESSHEHVYDAVEKPLQLAQTAAVL
EIIHGLIGLVRSPISATLPQIGSRLYVTWVILYSFPEIRTHFLVSSLVLSWSVTEIIRYS
FFGMKEVFGSAPSWLQWLRYSTFLLLYPSGISSEVGLIYLALPYIKNSENYCIRMPNKWN
YSFDNYYAALLVLGIYVPGSPHMYNYMLGQRKKVLSRSKKD
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttttttctcttttctaagacgtgtttacctttcaatttacaattggactgtt
tgctttggatgggcacaagttttgtattttgctgttaaaaccttaagagaatcaagtcat
gaacatgtatacgacgccgttgagaagcctcttcaacttgctcaaaccgccgccgttttg
gagattattcatggtttaattggtttggtgagatcaccaataagtgcaacacttcctcaa
attggttcaaggttgtatgttacttgggttattttgtatagctttccagagattcgaact
catttcctcgttagctctttggtgctcagttggtctgttacagagattattcggtattct
ttctttggcatgaaagaagtttttggatctgcaccatcatggcttcagtggctaaggtac
agcaccttcctattgttgtatccatccggcatttcaagtgaagtcggtttgatatacttg
gcattaccatacatcaagaattctgagaactactgcataaggatgcccaacaaatggaac
tactctttcgacaactactatgctgcactacttgtgctgggaatatacgttccagggagt
ccgcacatgtataactacatgcttggacagaggaagaaggtcctctctcgatccaagaaa
gattga
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