KEGG   PATHWAY: ats00195
Entry
ats00195                    Pathway                                
Name
Photosynthesis - Aegilops tauschii (wheat D)
Description
Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
Class
Metabolism; Energy metabolism
Pathway map
ats00195  Photosynthesis
ats00195

Organism
Aegilops tauschii (wheat D) [GN:ats]
Gene
109772509  oxygen-evolving enhancer protein 1, chloroplastic [KO:K02716]
109777519  psbP-like protein 1, chloroplastic [KO:K02717]
109745945  psbP-like protein 1, chloroplastic [KO:K02717]
109743652  oxygen-evolving enhancer protein 2, chloroplastic [KO:K02717]
109742612  pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [KO:K02717]
109762987  histone acetyltransferase p300-like isoform X1 [KO:K02717]
109780046  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
109738911  photosynthetic NDH subunit of lumenal location 2, chloroplastic-like [KO:K08901]
109778840  photosynthetic NDH subunit of lumenal location 2, chloroplastic-like [KO:K08901]
109783377  oxygen-evolving enhancer protein 3, chloroplastic-like [KO:K08901]
109762099  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
109756056  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
109776148  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
109779326  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
109787420  photosystem II 10 kDa polypeptide, chloroplastic-like [KO:K03541]
109750629  photosystem II 10 kDa polypeptide, chloroplastic [KO:K03541]
109731639  photosystem II 10 kDa polypeptide, chloroplastic-like [KO:K03541]
109752812  photosystem II 22 kDa protein, chloroplastic [KO:K03542]
109773446  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
109741873  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
109779559  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
109776867  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
109741890  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
109786607  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
109741896  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
109773435  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
109762665  photosystem II core complex proteins psbY, chloroplastic [KO:K02723]
109732790  photosystem II repair protein PSB27-H1, chloroplastic [KO:K08902]
109734014  photosystem II reaction center PSB28 protein, chloroplastic-like [KO:K08903]
109733474  photosystem II reaction center PSB28 protein, chloroplastic-like [KO:K08903]
109741437  photosystem I reaction center subunit II, chloroplastic [KO:K02692]
109767531  photosystem I reaction center subunit IV, chloroplastic [KO:K02693]
109759396  photosystem I reaction center subunit III, chloroplastic [KO:K02694]
109786122  photosystem I reaction center subunit V, chloroplastic [KO:K08905]
109782574  photosystem I reaction center subunit VI, chloroplastic [KO:K02695]
109759808  photosystem I reaction center subunit psaK, chloroplastic [KO:K02698]
109739150  photosystem I reaction center subunit XI, chloroplastic [KO:K02699]
109739267  photosystem I reaction center subunit N, chloroplastic [KO:K02701]
109753178  photosystem I subunit O [KO:K14332]
109739965  cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [KO:K02636] [EC:7.1.1.6]
109787183  cytochrome b6-f complex iron-sulfur subunit, chloroplastic [KO:K02636] [EC:7.1.1.6]
109766379  plastocyanin, chloroplastic [KO:K02638]
109747886  plastocyanin, chloroplastic [KO:K02638]
109734019  ferredoxin-3, chloroplastic-like [KO:K02639]
109747832  uncharacterized protein LOC109747832 [KO:K02639]
109753311  uncharacterized protein LOC109753311 [KO:K02639]
109751114  ferredoxin, root R-B1-like [KO:K02639]
109763577  ferredoxin, chloroplastic [KO:K02639]
109763588  ferredoxin-like [KO:K02639]
109744143  ferredoxin-6, chloroplastic-like [KO:K02639]
109762748  uncharacterized protein LOC109762748 [KO:K02639]
109780871  ferredoxin--NADP reductase, embryo isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
109734710  ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
109756468  ferredoxin--NADP reductase, root isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
109765119  ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
109732570  ferredoxin--NADP reductase, root isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
109778417  cytochrome c6, chloroplastic [KO:K08906]
109733065  ATP synthase subunit gamma, chloroplastic [KO:K02115]
109762091  ATP synthase delta chain, chloroplastic-like [KO:K02113]
109763214  ATP synthase delta chain, chloroplastic-like [KO:K02113]
109785264  ATP synthase subunit b', chloroplastic [KO:K02109]
Compound
C00001  H2O
C00002  ATP
C00005  NADPH
C00006  NADP+
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00034  Manganese
C00080  H+
C02061  Plastoquinone
C16693  Plastoquinol
Reference
PMID:14764885
  Authors
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S.
  Title
Architecture of the photosynthetic oxygen-evolving center.
  Journal
Science 303:1831-8 (2004)
DOI:10.1126/science.1093087
Reference
PMID:12518057
  Authors
Kamiya N, Shen JR.
  Title
Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.
  Journal
Proc Natl Acad Sci U S A 100:98-103 (2003)
DOI:10.1073/pnas.0135651100
Reference
PMID:11217865
  Authors
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P.
  Title
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
  Journal
Nature 409:739-743 (2001)
DOI:10.1038/35055589
Reference
PMID:11418848
  Authors
Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N.
  Title
Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.
  Journal
Nature 411:909-917 (2001)
DOI:10.1038/35082000
Reference
PMID:11369223
  Authors
Jones MR, Fyfe PK.
  Title
Photosynthesis: new light on biological oxygen production.
  Journal
Curr Biol 17:R318-R321 (2001)
DOI:10.1016/S0960-9822(01)00174-9
Reference
PMID:11914373
  Authors
Shen G, Zhao J, Reimer SK, Antonkine ML, Cai Q, Weiland SM, Golbeck JH, Bryant DA.
  Title
Assembly of photosystem I. I. Inactivation of the rubA gene encoding a membrane-associated rubredoxin in the cyanobacterium Synechococcus sp. PCC 7002 causes a loss of photosystem I activity.
  Journal
J Biol Chem 277:20343-54 (2002)
DOI:10.1074/jbc.M201103200
Related
pathway
ats00196  Photosynthesis - antenna proteins
ats00710  Carbon fixation by Calvin cycle
KO pathway
ko00195   
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