Aegilops tauschii (wheat D): 109739506
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Entry
109739506 CDS
T04345
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13
KO
K16189
phytochrome-interacting factor
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109739506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ats03000
]
109739506
Transcription factors [BR:
ats03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109739506
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
109739506
NCBI-ProteinID:
XP_020154183
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Position
5:501842801..501847351
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AA seq
414 aa
AA seq
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MDGNGRSAASHKKPLVADNDLVELLWHNGAVVAQPQTHPRPAPSGLAGGGGETAAWFQDD
VDALGNDVYAQLWNSIAVGAAPEVACAALPGPSSHPPPPQLPPPPMRSGIASSWTGGDIG
STFCGSNLVPEVPAGDREEASAAPPSEGTRGASTRDGGAGTSSSGGSGSNFGGSGLPSES
GGHAHKRKGRGKDDSDSRSEDVECEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRIN
EKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQIMWMTTGMAPMMFPGSHQFMPPM
AVGMNSACMPAAQGLNQMARVPYMNHSLSNHIPMNPSPAMNPMYIANQMQNIQLREAASN
HFLHLDGGQATAPQVAGPYAYTPQVAPKSQIPEVPDCTVAPISGPGQPPAPDGI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaatgggagatcggcggcgagccacaagaagcctctcgtcgcggacaacgac
ctggtggagctgctgtggcacaacggggcggtcgtcgcgcagccgcagacgcacccgagg
ccggcgcccagcggcctcgccggcggtggcggggagacggccgcgtggttccaggacgac
gtcgacgcgctggggaacgacgtctacgcacagctctggaacagcattgcggtgggcgcc
gccccggaggtcgcgtgcgcggcgctcccggggcccagctcccaccctcccccgccgcag
ctgccgccgccgccgatgcggagcggcatcgcctccagctggaccgggggcgacatcggc
tccaccttctgcggcagcaacctggtcccggaggtgccggcgggggacagagaggaggcg
agcgccgcgccgccgtcggaggggacgcgcggggcgagcacgcgcgacggcggcgccggc
acctcgtcgtccggcgggtccgggagcaacttcgggggctccggcctgccgagcgagagc
ggcggccatgcccacaagaggaaggggaggggcaaagacgactccgatagccgcagcgag
gatgtggagtgtgaggcgaccgaggagaccaaatcgtcgaggcggcacgggtcgaagcgg
aggagcagggcagctgaggttcataaccagtcagagaggaggcgaagggaccggatcaac
gaaaagatgcggtcgttgcaagaactcataccccactgcaacaaggctgacaaagcatca
atattagatgaggcgatcgagtacttaaagtccctccaaatgcaagttcagattatgtgg
atgaccaccgggatggcgccaatgatgtttcctggttctcaccagttcatgccgccgatg
gccgtgggcatgaactcggcatgcatgcctgcggcacagggtctaaatcagatggcaaga
gtgccatacatgaaccattccttgtcaaatcacatccctatgaacccatctccagccatg
aaccctatgtacattgcaaaccagatgcaaaacatacagctgagagaagcagcaagtaac
catttccttcacctagatggtgggcaggcaacggcacctcaggtagcaggaccatatgct
tatacaccacaagtagcaccaaaaagccagataccggaagtgccggattgtactgtcgcg
ccaatttctgggcccggacaaccacctgcacctgatggaatttag
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