Aegilops tauschii (wheat D): 109750422
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Entry
109750422 CDS
T04345
Name
(RefSeq) transcription factor APG isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats04075
Plant hormone signal transduction
ats04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109750422
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109750422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ats03000
]
109750422
Transcription factors [BR:
ats03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109750422
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
109750422
NCBI-ProteinID:
XP_020164967
UniProt:
A0A452XXY3
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Position
1:74425017..74427618
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AA seq
506 aa
AA seq
DB search
MLLRRSEPGNELEELLWDNGPALRRTASPFPPFSCSAAGTMKAQELAKHPASATAMAHGH
DDDAVPWLQHYPIIGVDDDGSGGDTAPLPQEYFSTLFPGFSDLPAAVASRDAGAPSTSHA
AVVVPPLPEPPAPPKQQQPPPRTTGEGVMNFSFFSRPLQRSLPQASVRPSAAGSKSVESM
LLQTNRLRSTPLFSEQRTAWLHPPKESPATASASRPPAPPVPVRHAAEPAAALPQRLQPE
ARAAALPPRLQPEVRAVALPQRLQSEARASEMPPPPATATTSSVCSDNGERSQLKRSSHQ
TLEWSVSQDDEDLDDEAGGLRRSAARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIP
NCNKIDKASMLEEAIEYLKTLQLQVQMMSTMGTAGLCMPPMMAMQHMQMPPMAHFHHHHL
GAMGFGMGAFDPRLVAGAGAAQFPYPMMPGAPMFGAHAMPPPPPFHQAAVAGAHMAAGPV
TNDAATAAQAEHEQTPGDHPQVPRAM
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgcaggagtgagccgggcaacgagttggaggagctgctctgggataacgga
ccggcgctccggcggacggcatcgcccttcccgcccttctcctgcagcgccgccggcact
atgaaggcgcaggagctcgccaagcaccccgcgtcggcgacggcgatggcgcacggacac
gacgacgacgccgtgccgtggttgcaacattaccccatcatcggcgtggacgacgacggc
agcggcggcgacacggccccgctgccccaggagtacttctccaccttgtttcccgggttc
tccgacctccccgctgcggtggcgagcagagatgccggagcgccatcaacgtctcacgca
gcggtcgtcgtgccgccgctgccggagccacctgcgccccccaagcagcagcagccgccg
cctcggaccaccggcgagggcgtcatgaacttctccttcttctcgaggcccctgcagcgc
tcgctgccgcaggccagcgtgagaccgtctgccgcggggagcaagtccgtcgagtcgatg
ctgctgcagaccaacaggctaagaagcacccctctgttctcggagcagaggacggcgtgg
ctgcatccgcccaaggagtcacccgccacggcgtccgcatcccgtcctccggcaccgccg
gtgcctgtccggcatgctgcagaaccggctgcggcgttaccccagagactgcaaccggaa
gccagggctgcggcgttaccaccgagattgcaaccggaagtgagggctgtggcgttaccc
cagagattgcaatcggaagcgagggcttccgagatgccaccgccgcccgcaacagcgacg
acctcgtctgtctgctccgacaacggtgagcggagccagctgaagaggagcagccaccag
actctggagtggtcggtcagtcaggacgacgaggatctcgacgacgaggccggcgggctg
agaaggtcggcggcgaggagcaccaagcgcggccgcaccgccgaagtgcacaacatgtcg
gagaggaggagaagggaccgaatcaacgagaaaatgcgcgccctgcaagaactcatcccc
aactgcaacaagatcgacaaggcgtcgatgctggaggaggccatcgagtacctcaagacc
ctgcagctccaggtccagatgatgtcgacgatggggacggccgggctgtgcatgccgccg
atgatggcgatgcagcacatgcagatgccgcccatggcgcacttccaccaccaccacctc
ggcgccatggggttcggcatgggcgccttcgacccgcgcctcgtcgccggcgccggcgcc
gcgcagttcccttacccgatgatgcccggcgcgcccatgttcggcgcccacgcgatgcct
cccccgccaccgttccaccaggcggcggtggcgggcgctcacatggctgccggcccggtc
accaacgacgccgccaccgcagcgcaggccgagcacgagcagacaccgggcgaccatccg
caggtcccacgagcaatgtag
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