KEGG   Aegilops tauschii (wheat D): 109751023
Entry
109751023         CDS       T04345                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1 isoform X1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109751023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ats03021]
    109751023
Enzymes [BR:ats01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     109751023
Transcription machinery [BR:ats03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     109751023
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 Zn_ribbon_2 RNA_pol_Rpb1_7
Other DBs
NCBI-GeneID: 109751023
NCBI-ProteinID: XP_020165520
LinkDB
Position
1D:complement(103795600..103807623)
AA seq 1431 aa
MCSFCRMEEPNAEMGMPTGELKGITFYLMTNTEMEKSSSASIVEPSDVSSAKLGLPNGAP
QCETCGAQSVRECDGHSGVIKLPATVFNPHLFEEVVQLLNQICPGCHTPKQNRDSKRSDG
ATSQATCKYCSKDGTKQYPDVIFKTLTSPRITLSKAKLLRDHNVMDKISLTAEVADRVTD
SAEVLPLDYWDFVPHHHPPQSNMTKILLSPYQVSHILEQLDPKLFSRFASRPELIFLSCL
PVTPNFHRVAELPYGFSDGPRLAYDDLTKAYKRTVDVGRKLDDLRQHPQFSVLASSLVTS
RVVECLKLSKLHSKKTDKESSTDTHGMKWLKDAILSKRSDNAFRGTMVGDPKIRLHEIGI
PVDLASNLVVSEHVNSYNFDNINLKCNCYLLANEKLVIKRSGKTIIVRKPNQLVIGDTVH
RLLQDGDLILINRPPSIHQHSLIGLSAKLLPVQSVLSINPLCCAPLAGDFDGDCLHGYVP
QSIQSRVELGELVSLSHQLLNAQDGRSLVSLTHDSLAAAYLLTSSEVLLKKTEVQQFQML
LCHPLSPTPGPAIMKSIHSHGPLWTGKQLFSMLLPSDMSFSIEPKVHIVDGEVLACPSES
FWLQNSISGLFSVMFKQYGDKALELLSSAQDVLCEFLTMRGLSVSLSDIYLFPDHDSRRK
LADGVNLALDDAEEAFRIKQILLSPDSIPILKCYDDCADLSQSYEQSNFIQSNLPIIKSS
IMAFKSVFSDLQKMVQQHTAKNNSMMMMTNAGSKGSMLKFVQQTACVGLQLPASRFPFRI
PSELSCASWNRHKSEGTGECLGGQNLYAVIRNSFAGGLNPLECLLHSISGRANFFSENAD
VPGTLTRKLMYHLRDLYVAYDGTVRSSYGQQIMQFTYDTAEDMCSDRNVEGELGAPVGSW
AACSISEAAYGALDHPVNSLEESPLMNLQDVLKCQKGGTSMDHVGLLFLSKNLKKYRYGL
EYASLEVKDHLEPVNFSDLVDTVMILYGGCGIESTKGSPWITHFHLSQEMMTKKRLGLTL
VVEELTEQYNAKRDKLNFPKVYISKGKCSADHECGNRQTCCITVVTQDDSNSMSQLDTIK
KRVIPNLLALLVKGFLEFKKVEIQCQEDSELVVKVVMSEEHCKSVKFWATLQKSCIAIME
LIDWERSRPGSVYDIFCSYGIDSAWKYFVESLRSKTDDIGRNIRREHLLVVANCLSVSGQ
FHGLSSQGLKQQRTRLSISSPFSEACFSRPAHTFINAAKQSSVDNLCGTVDAMAWGKEPS
TGTSGPFKIIYSGKAHAPIPNENIYDFLNSPEVWQAPGEAFLNGSTISVEQDFLVATVGI
WDNIIDMRTCLQNMLREYQLNECVVELDKSRVIEALRFHPRGREKIGAGIKDIKIGHHPS
HPGTRCFIMVRDDGTTEDFSYKKCVQAAADSISPELGRYVERILRNRAVSS
NT seq 4296 nt   +upstreamnt  +downstreamnt
atgtgttcgttctgcaggatggaggagccaaatgctgaaatgggaatgccaaccggggag
ctgaaaggcatcacattctatctcatgaccaatacagagatggaaaagtcaagcagcgcg
agcattgtagaaccatctgatgtcagtagtgccaagttgggactaccaaatggggcacca
cagtgtgagacttgcggagcgcagagtgtgcgtgaatgtgatggtcattctggcgtgatt
aagctgccggcaactgtgttcaacccgcatctattcgaggaagttgttcagttactgaat
cagatatgtcctggctgccacactccaaagcagaacagagattcaaagaggtcggatggg
gcaacaagtcaagcaacttgcaagtattgctcaaaggatggcactaaacaataccccgat
gtaatctttaagacactgacaagcccaagaataacattgtccaaggctaaacttctacgg
gaccataacgttatggacaaaatttcgcttactgcagaagttgctgacagagtgactgat
tcagctgaagttcttcccctggactattgggatttcgtacctcatcaccacccccctcaa
tcaaatatgaccaagatattattgtctccataccaagtctctcacatattggaacaactt
gatcctaagctatttagccggtttgcttcaaggccggagctaattttcctgtcgtgtttg
ccggtgactcctaacttccatcgcgtggcggagttgccctatgggttttcagatggccct
cgcctagcttatgatgacctgacaaaagcttacaagaggacggttgatgtcggtaggaaa
cttgatgacttgcgtcagcatccacagttcagtgttcttgcaagttcacttgtcacaagc
cgagttgtggagtgcctcaaattgtcaaagttacactctaaaaagacagataaggaatca
tcaacagacacacatggaatgaaatggttgaaggatgccattctcagcaaacggtctgat
aatgcttttcggggtactatggtcggtgatccgaagattagattgcatgaaattggcatc
cctgtggatttagcttcgaacttggttgtttctgagcatgttaactcctacaactttgac
aacataaatttgaagtgcaactgttaccttcttgccaatgaaaaactagtcattaagcgt
agtggaaagacaattattgttcggaagccaaatcagctggtaattggtgacactgtgcac
aggctgttgcaggatggtgatcttattcttatcaataggccaccgtcaatacatcaacac
tcccttattggactctctgcaaaattactcccagttcagtcggtactttcaatcaaccca
ctctgttgtgcaccactcgcgggagattttgatggggactgtttgcatggatatgtccca
cagtccatacagtcaagagttgagcttggggagctagttagtttgagccaccaactattg
aacgcgcaagatgggcgaagtttggtgtcattaacacatgactctctagctgcagcatat
ctgttaacaagctcagaggttttactaaagaaaactgaagttcagcaatttcaaatgtta
ttatgccatccactctcgccgacaccagggccagcaataatgaaatctatacactctcat
ggtccactgtggaccggtaagcagttgttcagcatgctgcttccatctgatatgagtttc
agcattgagcctaaggtacacatcgtagacggtgaagttcttgcctgcccatctgaatct
ttttggctgcagaatagcatatctggccttttttccgtcatgttcaaacaatatggcgac
aaggctcttgagttactctcttctgctcaggatgtactatgtgagtttttaaccatgaga
ggtttaagtgtcagtctttcggatatctatctgttcccggaccatgactcgaggagaaaa
ctagctgatggagttaatctggcattggatgatgctgaagaggcttttcgtattaaacag
atattgctaagtccagattccataccgattctgaaatgttatgacgactgtgctgattta
tcacaatcttatgaacagtccaatttcattcagagcaatctgccaattataaaatcttca
atcatggcgtttaagagtgtattcagtgatcttcagaagatggttcaacagcacacagcc
aaaaataattcaatgatgatgatgactaatgcaggaagtaagggtagcatgttgaagttt
gtgcaacaaactgcatgcgtcggtcttcaacttccagcaagcagattcccctttagaatt
ccgtcggaactctcatgtgccagctggaatagacataaatctgagggcacgggtgaatgc
ttgggaggccaaaacttgtatgctgtgatcaggaattcctttgctggtggtttaaatcca
ttggagtgtcttcttcattcgatatctggcagagcaaacttcttcagtgagaatgcagat
gttcctgggactttaacaagaaaactaatgtatcacctgagggatttatatgttgcttat
gatgggactgttagaagttcttacgggcagcagataatgcagttcacttatgatactgct
gaagacatgtgcagtgatcgcaatgtggaaggtgaactcggtgcccctgttggttcgtgg
gctgcttgttccatttcagaagctgcatatggagctttggatcacccagtgaacagcttg
gaggaatctcctctcatgaatttgcaggatgtattgaagtgccagaagggtggtacttct
atggatcatgttggtttgcttttcctgtcaaagaatctaaaaaaatatagatatggtttg
gagtatgcatcgctagaagttaaggatcatctcgagccagtgaacttctctgatttggtt
gacaccgtcatgatcctatatgggggatgtggtatagagtcaacaaaaggaagcccatgg
attactcattttcatctaagccaggaaatgatgacgaaaaaaagattgggactaacactt
gttgtggaagagcttacagaacaatacaatgccaaaagagacaagttaaacttccctaaa
gtttatatttcaaagggcaaatgttctgctgaccatgagtgcggtaacaggcagacttgt
tgcatcactgtggtaacacaggatgattcaaactctatgtctcaattggacactatcaag
aaaagggtgattccaaacctcctggccttactagtgaaaggatttttggaatttaagaaa
gttgagatccagtgtcaagaggacagtgaacttgttgtgaaagttgttatgtctgaggag
cattgcaagagtgtgaagttttgggctactctacaaaagtcttgcatagcaattatggag
ttgattgactgggagcggagccggccagggagcgtatatgatattttctgctcatatggc
atagactcagcatggaaatactttgttgaatctttaagatcaaaaactgatgatattgga
aggaatattcgccgcgaacacttgctggtcgtggcaaattgcctgtctgtaagtgggcag
ttccatggactaagcagtcaaggtttgaagcaacaacggactcgattatcaatctcatct
ccattttctgaagcttgtttttctaggcctgcacatacttttataaatgctgcaaagcag
tcttcagtggacaatctctgtggtactgtagatgcaatggcctggggcaaggagccttct
actgggacatcaggtcctttcaagattatttattctgggaaggcgcatgcacccatacca
aatgagaacatctatgacttcctaaatagccctgaagtttggcaagcgccgggtgaagct
ttcttgaacggtagcaccatatctgtggagcaagattttcttgttgctacagttggtata
tgggacaacattattgatatgcgcacttgcttgcagaacatgctacgagagtaccaatta
aatgaatgtgttgtggagctagataaatcacgtgtaatcgaggccctgagatttcatccc
agagggcgtgaaaagattggtgctggaataaaagatataaagattggacatcatcctagt
cacccaggaacaaggtgcttcattatggtacgggacgacggtaccactgaggacttttct
tacaagaaatgtgtccaggctgccgcggattctatctcgcctgagctcggacgttatgta
gagaggatactacggaacagagcagtttcgtcataa

DBGET integrated database retrieval system