Aegilops tauschii (wheat D): 109766858
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Entry
109766858 CDS
T04345
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13
KO
K16189
phytochrome-interacting factor 4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109766858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ats03000
]
109766858
Transcription factors [BR:
ats03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109766858
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
109766858
NCBI-ProteinID:
XP_020181205
UniProt:
A0A453LQC8
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Position
5D:complement(463728387..463733310)
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AA seq
486 aa
AA seq
DB search
MSQFVPDWGNMGDISRPLGEDDDLMELLWCNGNVVMQSQGHRKLPPRPEKVPAPPVVQED
EAGLWFPFALADSLDKDIFTDLFCEEPPGVDAGKAGRDGAPVLGDADRRSSQSSAVSAAS
DLMPPPKSTHVSCSSRQQSMSLADCGDNAGGVLSDLVQARAGKAAMEEGASSTLSAMGAS
FCGSNQVQVQGAVSEQGRAGHTTAYGGSGAGSALPSAVGSGNANARGRGYEATVASSSGR
SNYSFGVTATTATTGTEPTSTSNRSSKRKRGLDTEDSESPSEDAESESLALERKPPQKLT
TARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQ
MMWMGSGMAPPAVMFPGMQMHQYLPQMGPPSMARMPFMAPPQQGHGVSLPEQYAHFLGVN
PHHLQPPAHHHHHQHFAQGVGYYPLGAKALQQSPALHHVSNGNTGGGTPAATANATPGNA
IHPNKR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagccaattcgtgccagattggggaaacatgggggacatctccaggccactcggcgag
gacgatgacctcatggagctgctgtggtgcaacggcaatgtcgtcatgcagagccagggt
catcggaagctgccgccgaggcctgagaaggttccggcgccgccggtggtgcaagaagac
gaggccggcctgtggttcccgttcgcgctcgccgactcgctcgacaaggacatcttcacg
gacctcttctgcgaggaaccaccgggggtcgacgccggcaaggccggcagggacggtgcc
ccagtgttaggggacgccgacaggcgcagcagccagtcgtccgcggtgtcggcggcgagc
gacctgatgccgcctcccaagtccacgcacgtgtcctgctccagcaggcagcaatcgatg
agcctggccgactgcggcgacaacgccggcggcgtcctgtcggacctcgtccaggctcgg
gccgggaaggcggcgatggaggagggcgcgtcgtcgacgctgagcgcgatgggggcgagc
ttctgcgggagcaaccaggtgcaggtgcagggcgcggtgagcgagcaggggcgcgccggc
cacaccactgcctatggcggcagcggcgcaggcagcgctctgccctcggcggtggggagc
ggaaatgcaaacgccagaggcaggggctacgaggccacggtcgcctcctcgtccgggcgg
tccaactacagcttcggcgtgaccgccaccacggccaccaccggcaccgagccgacgagc
acgagcaaccggagcagcaagcgcaagcggggactggacacggaggactcggagagcccc
agcgaggacgccgagtcggaatcattggcgcttgagcgcaagccgccgcagaagctcacg
acggcgcggaggagccgcgccgccgaggtgcacaacctctccgagaggaggagacgagac
aggatcaacgagaagatgcgagcgctgcaagagctcataccccactgcaacaagactgac
aaggcgtcgatgctggacgaggcgatcgagtacctgaagacgctgcagatgcaggtgcag
atgatgtggatgggcagcggcatggcgccgccggcggtgatgttcccgggcatgcagatg
caccagtacctgccgcagatggggccgccgtccatggcgcggatgcccttcatggcgccg
ccgcagcagggccacggcgtgagcctgccggagcagtacgcgcacttcctcggcgtcaac
ccccaccacctgcagccgccggcccaccaccatcaccatcagcatttcgcgcagggggtg
ggctactacccgctaggggcgaaggccctgcagcagagtccggcgctccaccacgtgtcc
aatggcaacaccggcggtggcacgcctgccgctaccgccaacgccacgccggggaacgcg
atacacccaaacaaaagatga
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