Acinetobacter sp. TTH0-4: AMQ28_04935 Help Entry AMQ28_04935       CDS       T04075                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism att  Acinetobacter sp. TTH0-4 Pathway att03030   DNA replication att03410   Base excision repair att03420   Nucleotide excision repair att03430   Mismatch repair Brite KEGG Orthology (KO) [BR:att00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AMQ28_04935    03410 Base excision repair     AMQ28_04935    03420 Nucleotide excision repair     AMQ28_04935    03430 Mismatch repair     AMQ28_04935  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:att03032]     AMQ28_04935    03400 DNA repair and recombination proteins [BR:att03400]     AMQ28_04935 Enzymes [BR:att01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AMQ28_04935 DNA replication proteins [BR:att03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AMQ28_04935 DNA repair and recombination proteins [BR:att03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AMQ28_04935    NER (nucleotide excision repair)     GGR (global genome repair) factors      AMQ28_04935    MMR (mismatch excision repair)     DNA ligase      AMQ28_04935   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AMQ28_04935 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase BRCT HHH_5 PTCB-BRCT DNA_ligase_ZBD RUBY_RBDX Motif Other DBs NCBI-ProteinID:  ALD01764 LinkDB All DBs Position complement(1035027..1036964) Genome browser AA seq 645 aa AA seqDB search MSKYKFNDNQIAIIEKLGLNSDIDDAEKLFSSNDHNFEELEILLKVANALYRSGHPIIED NEYDEYLNYFKTLDPENPFLLSVEPEVLIDSKTVPLPKKMLSTDKAYSFDEIKKWTERIT KAASEIEFDQNLIEIRVTPKLDGYAAYDDGVTLYTRGDGVRGQDITRAFERGLKVAQNAK RGLGAGEIVINKSYFDEILSEKFENSRNIQAAIIAEKKVDEDVQNAIDNGACVFYPFSLL DNWTGSIEDLLSNFESILEKIWNSVDFDIDGLVLETKNLPIKEYMGSTRKFHRWQIAFKV NDESAEVEVLKVVPQTSRTGRVSPVAELVPTKLSGATLSRATVHNYSMVKKNGVGPGAII KLVRSGLVIPKIEEVIKRAEPELPENCPSCGAHLIWEGDHLICPNKSDCPAQTENTLIHF FKTLGNVDGFGPKVIEKITNQGIKHIHEIYQIPKHQFVEFGFGDKTSQNLIDQLQASRQI EIEDWRFLAAFGVTRLAGGNCDKLLRHHAIVQVFEISVEDMVKIDGFAQLSAEAIVEGLA NVREEFFKVYNLGFNLSVTPKESDRESSDSPIAGAVVVFTGSMQQGSRDDMEKNAKALGA KVAKTVTGKTTYLVTGDKVGETKINAARDKGVKVLTEQEYLNLIG NT seq 1938 nt NT seq  +upstreamnt  +downstreamnt atgtctaaatataaatttaatgacaaccaaatcgccattattgaaaagctaggtcttaat tcagatatagacgatgcagagaagcttttttcttcaaatgatcataattttgaagagttg gaaatattgcttaaagtagccaatgcactttacagatctggtcatccgattattgaagat aatgagtatgatgaatatcttaactacttcaaaactcttgatccagagaatccattctta ttaagtgtagagcctgaagttttaatcgatagcaaaacagttccacttccaaagaaaatg ctttctactgataaagcatattcttttgatgaaattaaaaaatggacggaaagaattact aaagctgcgtcagaaattgaatttgatcaaaatttaattgagattagggttacaccaaaa cttgatggttatgctgcttatgatgatggtgtaactctctacacccgaggtgatggggta agaggtcaagatattactcgtgcatttgagcgaggacttaaagtagcacaaaatgcaaaa agaggcttaggtgctggcgagattgtaattaataaaagctactttgatgaaattttgagt gaaaaatttgaaaactcacgcaatatccaagcagcaattattgctgaaaagaaagttgat gaagatgttcaaaatgcaattgataatggtgcttgtgtcttttaccctttttcactatta gataactggacgggaagtattgaagatttattgtcaaactttgaaagtattttagagaaa atatggaactcagttgattttgatattgatggattagtcttagagacaaaaaatctgcca attaaagagtatatgggctctacgagaaaatttcatagatggcaaattgcttttaaagta aatgatgaatcggctgaagtcgaagtattgaaagtagttcctcagacttcaaggactggt cgagtttcaccagtagctgaattggttcctactaaacttagtggggctactttaagtaga gcaactgttcataactacagtatggtgaagaaaaatggagtgggtcccggcgcaatcatt aagctagtcagaagtggcttagttattccaaaaattgaagaagttatcaaacgagcagag ccagaattacctgaaaattgtcctagttgtggtgctcaccttatttgggaaggcgatcat ttaatatgcccgaataagtcagactgtcctgcccaaaccgagaataccctgattcatttt tttaaaacactgggtaatgtagatggctttgggccaaaggtgattgaaaaaataactaat caaggtattaagcacatccacgaaatctatcagattcctaagcatcaatttgtagagttt ggatttggagataaaacgtcacagaatcttatcgatcaactccaagcaagtagacagatt gaaatagaggattggaggtttcttgctgcatttggagttacccgattagctggcggaaac tgtgataaattacttcggcatcatgccatagttcaggtttttgaaatatcagtcgaggat atggttaaaatagatggatttgcacaactaagcgctgaagctattgtcgaaggtttagca aatgttagagaagagtttttcaaagtatataacctcggtttcaacttaagtgttacaccc aaggaatctgatagagaaagttcagattcgcctatagctggagcagtcgttgtatttact ggctcgatgcaacaaggttcccgtgacgatatggaaaagaatgcaaaagcacttggagct aaagtggctaaaactgttaccggtaaaactacctatctggtaactggcgacaaggtcggt gaaactaagattaatgcagctcgtgataaaggcgttaaggtattaactgaacaggaatac cttaacttaattggttaa

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