Acidiferrobacter thiooxydans: A9R16_012580
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Entry
A9R16_012580 CDS
T07877
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
aty
Acidiferrobacter thiooxydans
Pathway
aty03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A9R16_012580 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aty03400
]
A9R16_012580 (nth)
Enzymes [BR:
aty01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A9R16_012580 (nth)
DNA repair and recombination proteins [BR:
aty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A9R16_012580 (nth)
Prokaryotic type
A9R16_012580 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UEN99248
LinkDB
All DBs
Position
2635460..2636194
Genome browser
AA seq
244 aa
AA seq
DB search
MGPAEREAVFERLQAANPHPTTELQYGSPFQLLIAVLLSAQSTDRAVNKATARLFAIAPD
AHTMLGLHAETLKDCIATIGLYNTKARHIRETCKILVRDYGGSVPRERAALEALPGVGRK
TANVILNTAFGEPAIAVDTHIFRVANRLGLAPGRTVRAVEERLSRLVPERFRHDAHHWLI
LHGRYVCKARRPACQQCVLFDLCAYRDKVPSWTASESPQVSDAARGPSRSLPRRRSRAGS
RERT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggggcctgcggaacgcgaggcggtgttcgagcgcctgcaggcggccaacccgcatccg
acgaccgagctccagtatggaagtccctttcagctcttgatcgcggtcctgttgtccgcc
cagtcgaccgaccgggcggtcaacaaggccacggcccggctgtttgcgatcgcgcccgac
gcgcacaccatgctcgggctgcacgccgagaccctgaaagactgcatagcgacgatcggt
ctttacaacaccaaggcgcgccatatccgcgagacctgcaagatactggttcgcgattat
ggcggttcggtaccacgcgagcgcgccgccctagaggccctgcccggcgtcggacgcaag
accgcgaacgtcattctgaacaccgccttcggggagcctgccatcgccgtcgacacccac
atcttccgggtcgctaatcgcctgggcctggccccgggtcgcacggtgcgcgcagtcgag
gagcgcctgtcgcggctcgtgcccgaacggtttcgccacgacgcccaccactggctcatc
ctgcacgggcgctatgtctgcaaggcgcgccgacctgcctgccagcaatgcgtcctgttt
gacttgtgtgcctatcgcgataaagtaccatcatggacagcatcagagtcgccacaggtc
tcggacgcggcccgcgggcccagccggagcttgccgcgacggcggtcacgcgcgggctcg
cgcgagcgcacataa
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integrated database retrieval system
