Acidiferrobacter thiooxydans: A9R16_012935
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Entry
A9R16_012935 CDS
T07877
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
aty
Acidiferrobacter thiooxydans
Pathway
aty00300
Lysine biosynthesis
aty00550
Peptidoglycan biosynthesis
aty01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A9R16_012935
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A9R16_012935
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aty01011
]
A9R16_012935
Enzymes [BR:
aty01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
A9R16_012935
Peptidoglycan biosynthesis and degradation proteins [BR:
aty01011
]
Precursor biosynthesis
Amino acid ligase
A9R16_012935
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PDEase_I_N
Motif
Other DBs
NCBI-ProteinID:
UEN99317
LinkDB
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Position
complement(2718981..2720438)
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AA seq
485 aa
AA seq
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MTAMLATLLQGIRELPPGVDRPIAALSLDSRTVVPGALFMALAGTSQDGRRFISDAVARG
AAAVVTESLDDARLGTVPVIACPGLRHKVGVMADRFYGSPSRALSVIGVTGTNGKTTTSH
LIAYAMNMRSPCALIGTLGNGFPGALLPAEHTTPDAISLHRWLDRFRREGASAVSMEVSS
HALDQGRVAGAHFLGAVFTNLTRDHLDYHGDMGRYGEAKARLFTLPDLAFAVLNGDDAFS
EVLKDRLPPGVRAWRYGGTGDVRVQDVRATARGLEIVLLAPEGPVTLKSPLIGHFNVYNL
AAALTVLVALGWRARDAADALAVVTPIPGRMEPVPGRADQPFVVVDYAHTPDALEKALAG
ARAHAAGRVICVFGCGGDRDRGKRALMGACASRYSDLAIVTHDNPRHEDPERIIADILKG
VPDEARAHLVVMGDRQAAIARALREGSAGDVVVIAGKGHEEYQQFGDRRVPYSDRLTARQ
LLGSP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccatgctggccacacttttgcagggcatccgcgaacttccgccgggcgtcgat
cggccgatcgcggccttgagcctcgacagtcgtacggtggtgccgggtgccttgttcatg
gccctggccggtacgagtcaggatgggcgccgtttcatcagtgatgcggtggcgcgcggc
gcggccgcggtcgtgaccgaaagtctggacgatgcccggttaggcacggtcccggtcatc
gcctgccctggcctgcgccataaggtcggcgtcatggccgaccgtttctatggaagccca
tcacgggcgctgtcggtcattggagtgaccgggaccaacggtaagaccacgaccagtcat
ctcatagcctatgccatgaacatgcgcagtccctgtgccctgatcgggacgctcggtaac
ggattccccggagccctgttgccggccgagcacaccacgccggatgcgatatctctgcat
cgctggctggaccgcttccggcgcgagggggcgagcgcggtatcgatggaagtgtcctcg
catgcgctcgatcagggccgggtcgcgggggcgcatttcctgggcgcggtttttacgaac
ctcacgcgcgaccatctggattatcatggggacatggggcgctacggggaggccaaggcg
cggctgttcacgctgcctgacctggcatttgcggtcctcaatggcgacgatgcgttcagc
gaggtcttgaaggaccggttaccgcctggagtgcgggcgtggcgctatgggggtacgggg
gacgtgcgcgttcaggacgtccgggcgaccgcgcgaggtctcgagatcgtgttgctcgcc
ccggaaggtcccgtgaccctaaagagccccttgatcggccatttcaatgtctacaatctg
gccgcggcgctgaccgtgcttgtggcgttgggctggcgggcgcgcgatgccgccgacgcc
ctggcggtcgtcacccccatccccggacgcatggagcccgtaccggggcgcgccgatcag
ccgttcgtggtggtcgattatgcccacacccccgatgccttggagaaggccctggccggg
gcgcgtgcccatgccgcggggcgggtcatctgtgtcttcggatgcggtggggatcgtgat
cgcggtaagcgtgcgctcatgggggcgtgcgctagccgttacagtgatctcgccatcgtg
acccacgacaaccctcgccacgaggacccggagcgcattattgccgacatcctgaaaggg
gttcccgacgaggcccgcgcgcatctggtggtcatgggcgatcgccaggcggcgatcgcg
cgcgcactacgcgaggggtccgcgggtgatgtcgtggtgattgccggcaaggggcatgag
gaatatcagcagttcggcgatcggcgagtcccatacagcgatcgcctcaccgcccgccag
ttactggggtcgccatga
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