Aureimonas sp. AU20: M673_15255
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Entry
M673_15255 CDS
T04161
Name
(GenBank) hypothetical protein
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aua
Aureimonas sp. AU20
Pathway
aua03030
DNA replication
aua03410
Base excision repair
aua03420
Nucleotide excision repair
aua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M673_15255
03410 Base excision repair
M673_15255
03420 Nucleotide excision repair
M673_15255
03430 Mismatch repair
M673_15255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aua03032
]
M673_15255
03400 DNA repair and recombination proteins [BR:
aua03400
]
M673_15255
Enzymes [BR:
aua01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
M673_15255
DNA replication proteins [BR:
aua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M673_15255
DNA repair and recombination proteins [BR:
aua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
M673_15255
NER (nucleotide excision repair)
GGR (global genome repair) factors
M673_15255
MMR (mismatch excision repair)
DNA ligase
M673_15255
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M673_15255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
ALN74083
LinkDB
All DBs
Position
complement(3275789..3278293)
Genome browser
AA seq
834 aa
AA seq
DB search
MRAMSDLFDLDTMTPAEAAAELERLSLEIAEHNRRYHEDDAPTVTDAEFDALRRRNEAIE
ARFPDLVRADTPSRKVGSAPSAKFAKIRHAVPMLSLDNAFADEDVADFARRVRRFLGLSE
DAKLAITAEPKIDGLSLSLRYEKGRLVSAATRGDGQVGEDVTANARTLDDIPGELTGFSP
EIFEVRGEVYMTHADFAALNARLLAEAGEGAEGEGEGARKARQFANPRNAAAGSLRQKDA
TVTKSRPLRFFAYAWGQTSELPGETQSEVVAALQAMGFQTNAVPQNGRTEPLMRRLETVD
GLIEHYRRIEAERASLGYDIDGVVYKVDDLEQQRELGFVSRAPRWAIAHKFSAEQATTVV
EEIVINVGRTGKLAPLAKLRPVTVGGVVVSNVTLHNEDYVAGRDADGQPIRGGRDIRIGD
TVVIQRAGDVIPQVVDVVIEKRPDGAEPFLYPDHCPICGSKAEREINPRTGRLDSVRRCT
AAMTCPAQAKEGLKHFVSRNAFDIEGLGGTFVEELFDAGLARQPADLFRMEFDRLRDVIE
ARRRALSEARRQAEGKAEPAKPAKRNETTKAIDNLLGAIEARKTVSLDRFIFALGIPEIG
EASAKALARHFDDVRALIGGVDAAERGRPGEDWAELSSLNTIGGVTFERLMTVDEAKLND
TEWKPLRDGELGLKANQRVALRERYGEEGEGLVEALRRAKAGAPGDAFLRLTRDGDIGTV
ATLSLIHFFAEAHNREAVEALLDAGVSTTNERAAPPPASSPVRDKIVVFTGTLEKMTRGE
AKERAEALGAKVSGSVSKKTDLVVAGPGAGSKLVDAQKHGVKVISEDEWLAMIG
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccatgtccgaccttttcgatctcgacacgatgactccggccgaggcggcggcg
gagctggaacggctctctctcgaaatcgccgagcacaatcggcgctatcacgaagacgac
gcgccaaccgtcaccgacgccgagttcgacgcgctgcgtcggcgcaacgaggcgatcgaa
gcgcgctttcccgatctggtgcgggcggacacaccctcccgcaaggtcggctcggcgccg
tccgccaagttcgccaagatccggcacgccgtgcccatgctctcgctcgacaacgccttc
gcggacgaggatgtcgccgacttcgcccgccgcgtgcgccgcttcctcggcctgtcggag
gatgccaagctcgccatcacggccgagccgaagatcgacggcctgtccctctctctacgc
tacgaaaaggggcgcctcgtctcggccgcgacgcgcggcgacggtcaggtgggcgaggac
gtgacggccaatgccaggacgctggacgacattccgggcgagctgacgggtttttcgccc
gaaatcttcgaggtgcgcggcgaggtctacatgacccatgccgacttcgccgccctcaac
gcccggcttctggcggaagccggcgaaggggcagagggcgaaggcgagggcgcccggaag
gcgcgccagttcgccaacccgcgcaacgcggccgccggctcgctgcgccagaaggacgcc
accgtcaccaagtcccggcccctgcgcttcttcgcctatgcctggggacagacgagcgag
ctgccgggcgagacgcagagcgaggtcgtggccgctctccaggcgatgggcttccagacc
aatgccgtgccgcagaacgggcgcaccgagcccctgatgcgccgcttggagacagtcgac
ggcctgatcgagcactaccgccgcatcgaggcggagcgagcgagcctgggctacgacatc
gacggcgtcgtctacaaggtggacgatctcgaacagcagcgcgaactcggcttcgtttcg
cgcgcgccgcgctgggccatcgcgcacaagttctccgccgagcaggcgaccacggtcgtg
gaggagatcgtcatcaatgtcggccgcacgggcaagctcgcgccgctggccaagctgcgg
ccggtgacggtcggcggcgtcgtcgtgtcgaacgtcacgctgcacaacgaggactatgtg
gccgggcgcgatgccgacggccaaccgatccggggtgggcgcgacattcgcatcggtgac
acggtggtgatccagcgcgcgggcgacgtgatcccgcaggtcgtggacgtcgtcatcgag
aagcgacccgacggcgccgagcccttcctctatcccgaccattgcccgatctgcggctcc
aaggcggagcgcgagatcaatccgcgcaccgggcggctggactccgtgcgccgctgcacg
gcggccatgacatgccccgcccaggccaaggaagggctgaagcatttcgtctcgcgcaac
gccttcgacatcgagggattgggggggactttcgtggaggagctgttcgacgccggcctc
gcgcgccagcccgccgacctctttcgcatggagttcgatcggctgcgcgatgtgatcgag
gcgcgccgtcgcgccttgtccgaggcgcgccgacaggccgagggcaaggccgagccggcc
aagcccgccaaacgcaacgagaccaccaaggcgatcgacaatcttctcggcgccatcgag
gcgagaaagaccgtctcgctcgaccgcttcatcttcgcgctcggaatccctgagatcggc
gaagcttcggccaaggcgctggcgcgtcacttcgacgatgtgcgcgcgctgatcgggggg
gtggacgccgccgagcgcgggcgcccgggcgaagactgggcggagctgagctcgctgaac
acgatcggcggcgtgaccttcgagcggctcatgacggtggacgaggccaagctgaacgac
accgaatggaagccgctgcgcgacggtgagctcggtctcaaggccaaccagcgcgtggcg
ttgcgcgagcgctatggcgaggaaggcgaaggcctggtggaggcgctgcgccgcgccaag
gccggcgcgccgggcgatgccttcctgcggctgacgcgcgacggcgacatcggcacggtc
gcaacgctgtcactcatccatttcttcgccgaagcgcacaatcgcgaggcggtcgaggcg
ctgctcgacgccggcgtctcaaccaccaacgagcgcgccgcgccgccgcccgcttcctcc
ccggtcagggacaagatcgtcgtcttcaccggcacgttggagaagatgacgcgcggcgag
gcgaaggaacgggccgaggcgctgggcgccaaggtctcgggttccgtgtcgaagaagacc
gatctcgtggtggcggggcccggcgccggctccaagctcgtggacgcgcagaagcacggg
gtcaaggtcatttccgaagacgagtggctggcgatgatcggctga
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