Aerococcus urinaehominis: AWM75_05355
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Entry
AWM75_05355 CDS
T04284
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
auh
Aerococcus urinaehominis
Pathway
auh03030
DNA replication
auh03410
Base excision repair
auh03420
Nucleotide excision repair
auh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
auh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWM75_05355 (ligA)
03410 Base excision repair
AWM75_05355 (ligA)
03420 Nucleotide excision repair
AWM75_05355 (ligA)
03430 Mismatch repair
AWM75_05355 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
auh03032
]
AWM75_05355 (ligA)
03400 DNA repair and recombination proteins [BR:
auh03400
]
AWM75_05355 (ligA)
Enzymes [BR:
auh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AWM75_05355 (ligA)
DNA replication proteins [BR:
auh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AWM75_05355 (ligA)
DNA repair and recombination proteins [BR:
auh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AWM75_05355 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWM75_05355 (ligA)
MMR (mismatch excision repair)
DNA ligase
AWM75_05355 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AWM75_05355 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
HHH_8
BRCT_2
RNA_ligase
Zn_ribbon_PF0610
HrpB_C
Motif
Other DBs
NCBI-ProteinID:
AMB99455
UniProt:
A0A0X8FLE9
LinkDB
All DBs
Position
1174088..1176085
Genome browser
AA seq
665 aa
AA seq
DB search
MSKADLRRLVDLTDQLNQYAYQYYVLDQPTITDAEYDQLYQELLALEAQYPDYVQADSPS
HRVGMLAQSGLEKVTHETPMLSLANAFNQEDLARFVASSQAASEGPVTYVGELKIDGLSV
SLRYQDGRLVQAATRGDGQIGEDITNNVRTIASVPLKLPEPLDIEVRGEIFMPKASFLAL
NQAREDQGLPTFANPRNSAAGSIRQLDSRITAQRKLDVFLYSGVFSPDLGLASQSQMLAQ
FKEWGFHINDQTRSLTGLADMWDFVEEMTSQRHDLPYDIDGIVFKVDDFDQQAQLGHTVK
APRWAIAYKFPAEEQATRIRDIEWTVGRTGVVTPTAVMDPVLLAGSTVSRASLHNADLIQ
EKDIRLGDQVKIHKAGDIIPEVIAVDLDQRPADSQPYQIPSQCPECQSDLIHLDDEVALR
CVNPACPAQAKEKLYHFVSRDAMNVTGLGPKVLEQLYDRRLVKDPSDLYQLEKDQLLTLD
KIGDKSADNLLAALSASKENSLDRLVFGLGIRHVGSKAARDIASHYPTMAAILAANQEEL
AQIDGIGQVIANSVVEYFDNEDVQALIEKLANLGVNMIYQGPRPGQTSDLDSFWQGKTVV
LTGKMATYSRPEAKKLIEAQGGKVTGSVSRNTDILIAGSDAGSKLAKAQYLGVTIFSEAD
MLDQL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagcagatttacgaagattggttgacttgactgaccaacttaaccaatatgcc
taccaatattatgtcctggaccagccaacaattactgatgctgagtatgaccagctctac
caagaactcttagcattggaagcccagtacccagattatgttcaggcggattcaccttcg
catcgcgttggcatgctagcccaatctggcctagagaaagtgactcatgagaccccaatg
ctgtccctagctaatgcctttaaccaggaagatctagcgcgttttgtggcatcgagccaa
gctgccagtgaaggtccagttacttatgtgggcgagttaaaaattgacggactatccgta
tctttacgctaccaggatggccgcttggttcaagcagctacccggggcgatggtcagatt
ggggaggatattaccaacaatgtgcgaacgattgcctcggttcctttaaaattacctgaa
cctttggatattgaagtccggggagaaatttttatgcccaaggcttcattcttagccctc
aaccaggccagggaagaccaaggcctccctacctttgccaacccacgtaattcagcggcc
ggctcaatccgccaactggacagccggattactgcccaacggaaactagacgttttcctc
tatagcggtgtctttagcccagatttgggcttggctagccaatcccaaatgttggcccaa
tttaaggagtggggctttcatattaatgaccaaacgcggtctttgacgggattagccgat
atgtgggattttgtagaagaaatgaccagccagcgccatgacctgccttatgatattgat
ggtattgttttcaaggtagatgattttgaccagcaagcccaactaggccatacggttaaa
gcgccacgttgggcaattgcctacaagtttccagctgaagaacaggcgacaagaatccgt
gatattgagtggacggtaggtcggactggggtggtcacgccgactgcagtaatggatcct
gtcttactagctggctctaccgttagtcgggctagccttcataatgcggacttgatccaa
gaaaaggatattcgactaggtgaccaggttaaaattcataaagccggggacattattcca
gaagtcattgcggttgatcttgatcaacgcccggctgatagccagccttatcagattccg
agccagtgcccagaatgccagtctgatttaatccatctggatgatgaagtggccttacgc
tgcgtaaacccagcctgtccagcccaggccaaggaaaagctctatcattttgtttcccgg
gatgccatgaatgtgacaggcctgggtccaaaagttttagaacagctctatgaccgccgc
ttagttaaggatcctagcgacctctaccagttagaaaaagaccagctcttgaccctggat
aaaattggtgacaaatcggccgataatcttttagcagctctcagtgcatctaaggaaaat
tctctagaccgattagtgtttggcttgggtattcgccatgtcggcagcaaggcggcccga
gatattgccagtcattatccgaccatggcagctattttagcggctaatcaggaagaatta
gctcaaattgatgggattgggcaggtgattgccaattctgtggtagaatattttgataat
gaggatgtccaagccctaatcgaaaagctagctaatttaggggtaaatatgatctatcaa
ggcccaagacctggtcagactagtgatttagatagtttttggcagggcaagacggttgtc
ttgaccggtaaaatggcgacctacagtcggcctgaggctaaaaaactgattgaagcccaa
gggggtaaagtcactggttccgtgtctaggaatacggatatcctaattgctggtagtgac
gcgggttctaagttagctaaggcccaatatttaggcgttactatctttagcgaagctgat
atgctcgaccaattgtaa
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integrated database retrieval system
