Aerococcus sp. Group 1: HMPREF9243_0556
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Entry
HMPREF9243_0556 CDS
T01447
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
aur
Aerococcus sp. Group 1
Pathway
aur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF9243_0556 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aur03400
]
HMPREF9243_0556 (nth)
Enzymes [BR:
aur01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HMPREF9243_0556 (nth)
DNA repair and recombination proteins [BR:
aur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF9243_0556 (nth)
Prokaryotic type
HMPREF9243_0556 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
DUF4294
BSP
Motif
Other DBs
NCBI-ProteinID:
AEA01281
UniProt:
F2I836
LinkDB
All DBs
Position
complement(555678..556340)
Genome browser
AA seq
220 aa
AA seq
DB search
MLSDQNAYYLLQEMIKFYPHVTTELNYETNFQLLIAVILSAQTTDQGVNKVTANLFRDYP
TAKKMAQANPKDLEPYIQPIGLYKNKAKYIQKAAQQIIEDFDGQVPKDRKDIESITGVGR
KTANVVLSIAYDVPAFAVDTHVQRVCKHHRIVDQGANVKDVEKRVTELLDESQWRQAHQA
LVRFGRYICTARKPTCYAYDQLFHLPDPSEEDLLPKEGEK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgctatctgaccaaaatgcctactatctcctccaagagatgattaaattttaccctcat
gtgacgactgagttaaactatgagaccaattttcaattgctcatcgccgtcatccttagt
gcccaaactaccgaccaaggggtcaataaggtcaccgctaacttatttagggactatccc
actgccaaaaagatggcccaggcgaatcctaaagacctagaaccctatatccaacccatt
ggtctctataaaaataaggccaaatacatccaaaaagcggcccaacaaatcattgaagac
tttgatggccaggttcctaaagaccgtaaagacattgagagcatcactggcgttggtcgt
aaaacagctaatgtggtcctaagcattgcctatgatgtgccggcttttgcggttgatacc
cacgtccaaagggtttgtaaacaccaccgcatcgttgaccaaggcgccaatgtcaaagat
gttgaaaagcgggtaacggaattgctggatgaatcccaatggcggcaagcccaccaagcc
ttagtccgctttggtcgctatatttgtaccgcaagaaaacccacatgctatgcctatgac
cagttatttcacctgcctgatcctagtgaagaagacctattacctaaagaaggcgaaaaa
taa
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