KEGG   Trichormus variabilis: Ava_1731
Entry
Ava_1731          CDS       T00277                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ava  Trichormus variabilis
Pathway
ava03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ava00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Ava_1731
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ava03400]
    Ava_1731
Enzymes [BR:ava01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Ava_1731
DNA repair and recombination proteins [BR:ava03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Ava_1731
 Prokaryotic type
     Ava_1731
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RHH_8 RecR_HhH
Other DBs
NCBI-ProteinID: ABA21353
UniProt: Q3MCD3
LinkDB
Position
2166340..2167011
AA seq 223 aa
MSTTTRKSPSKKQRALEVLSRLKRLYPDATCSLNYTTTVQLLVATILSAQCTDERVNLVT
PALFSRFPDAPSLANADLTELENLVRSTGFYRNKAKNIQAACRMIVSEYNSVVPNTMEQL
LKLPGVARKTANVVLAHAYGINAGVTVDTHVKRLSQRLGLTKYPDPVHIEQDLMKLLPQP
DWENWSIRLIYHGRAVCKARSPVCEACELADLCPSVTKTIIVG
NT seq 672 nt   +upstreamnt  +downstreamnt
gtgagtactactacccgtaaatcaccttctaaaaagcaacgggcgttagaagttctctct
cgcctgaagcgtctttatcccgatgccacctgctccttaaattacaccacaacagtacag
ttgctggtggcaactattctctcagcccagtgtacggatgagcgagtcaatctagttaca
ccagctttatttagccgctttcctgatgcgcctagtctagcgaatgcggatttaacagag
ttagaaaacttggtacgttccacagggttttatcgcaataaagccaaaaatattcaagcc
gcctgtcgcatgattgttagtgagtataactctgtggttcccaacacaatggaacagttg
cttaaactgcctggtgtggcgagaaaaacggcaaatgtggttttagctcatgcctatggt
atcaatgctggggtgacagtagatacccatgtgaagcgcctcagccaacgcttaggttta
actaaatatccagaccccgttcacattgaacaggatttaatgaaattactgccccaacca
gattgggaaaattggtcaattcggctaatttatcacggtcgcgctgtctgtaaagcccgt
tctcctgtatgtgaggcttgcgaattggcggatttatgtccgtctgtcacgaaaacaatt
attgttgggtag

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