Trichormus variabilis: Ava_2544
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Entry
Ava_2544 CDS
T00277
Name
(GenBank) Acriflavin resistance protein
KO
K18138
multidrug efflux pump
Organism
ava
Trichormus variabilis
Pathway
ava01501
beta-Lactam resistance
ava01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ava_2544
01503 Cationic antimicrobial peptide (CAMP) resistance
Ava_2544
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_2544
01504 Antimicrobial resistance genes [BR:
ava01504
]
Ava_2544
Transporters [BR:
ava02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Ava_2544
Antimicrobial resistance genes [BR:
ava01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Ava_2544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
ABA22159
UniProt:
Q3MA27
LinkDB
All DBs
Position
3144922..3148185
Genome browser
AA seq
1087 aa
AA seq
DB search
MQQVNKSGGFSISTVSIRQHIGTLMLTLAVMVLGVFFIINLPVDLLPSITYPRIGVRIEA
PGVSPEVAIDEVTRPLEEAFSATEGVVQIFSQTREGQVSLDLFFQPGGNIDQALNDATAA
FNRARNGLPDTIEEPRLFKIDPSQLPVYEFALTSPSLEGLDLRVFAEEELARELGVVPGV
AGVDVSGGVQEEVRVNIDLDRLQALGVGLNDVLDELRNRNVDISGGRILGQNSEPLTRTV
GRFQSADELRNLSFEVSSTASSNPSQQSTVNSQPSTINNRRVYLRDFAQIIDGSEQQRIY
VSLNGEPAVKVSVQKQPDANTINVVDAVKKRLEELRQSSVVPEGTVITPTLDESRFIRNS
ISNVTSSGLIGTALAAIAVLLFLGSLRQTFIIVIAIPLATLAAIILMGLFGLSINVFSLG
GLALGVGIVVDNSIVMLESIAEGVGMTPGKDSKSRLSHKQLIAQAETSSQEVESALVAST
STNLVAVLPFLLIGGFIALLFNELILTITFSVAASIVIAVTVVPMLASRLLGWKFSSGLS
NFWPLRKFNERFEAATRGYGRFLAGILRWRLVTVAIAILLFGGGSLWMAPQIPQQILPRI
STGQASLFAQFPPGTPLETNSKVMSAVDEIIRQQPETEYTFTTAGGALFGTNTNANPLRG
TSTITLKPGTNVDTYVERVTQELNKLNLAGIRLRLAPGQVRGLITNNSPVRNADVDVILQ
GTNADTLQQASRQVLAALEEQATQVRFRPDADERQPEIQILPDWERVSALGLTTRDIGDT
IQTALEGSVPTQLQRGNRLVDVRVQLNESAVQTGSQLQRLPLFVGNNRQVRLSDVAKIVE
AQAPGEIQRINQRQVIIFAGNLTEGASLSRAIEQVNNVISNLELPEGVSVLPSAAAESNR
QLQSSLQLLGGLASFLVFVVMAVQYNSLIDPLVIMFTIPLALAGGIFGLYITNTAIGATV
IVGAVLLVGIVVNNAIIMVELANQIRDRDKVDRRTAILQAAPQRLRPILMTTITTVLGMF
PLALGIGEGSEFLQPLGVVVFSGLSLATLLTLFIIPCFYTLLHDLLSGAWSKPVFIWWRV
WRKRFTL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagtaaataaaagtggcggatttagtattagtaccgtatcaattcgccaacat
atcggtacactcatgctcaccttagcagttatggtgctgggtgtatttttcattatcaat
ttgcccgtagatttattaccctcaattacctatccccgcattggtgtacgcatagaagca
cctggagtttccccggaggtagcaattgatgaagtgactagacctttggaagaagccttc
tcggcaacagaaggtgtggtacagattttttctcaaactcgtgagggacaagtcagtttg
gatttgttctttcaaccaggaggtaatattgaccaagctctcaatgatgctactgcggct
ttcaacagagcgagaaacggcttaccagacacaattgaagaaccgcgtctgttcaaaatc
gatccttcccagttaccagtatatgaattcgccttaacatccccctccttagaagggcta
gatttacgagtgtttgcagaagaagaactagcccgcgaattgggtgttgttcctggagta
gctggggtagacgtatcgggcggagtgcaagaagaagttagagttaatattgatttagac
cgcttgcaagctttgggtgtaggtttaaatgatgttctagatgaactcagaaaccgcaac
gttgatatttctggtggtcggattttaggacaaaattccgaacctttaacccgtactgtt
ggacgctttcaaagtgccgacgaactcagaaatttgtcctttgaggtctcctcaacagct
tcctcaaatcccagtcaacagtcaacagtcaacagtcaaccatcaaccattaacaaccgc
cgcgtttatctccgggactttgcccaaattatagatggttcagaacaacaacggatatat
gtctcactcaacggtgagccggcagtcaaagtcagtgttcaaaagcaaccagatgctaac
actattaatgttgttgatgctgtaaaaaaacgtttagaagaactgcgacaatctagcgta
gttcctgaaggtaccgtgattacacctaccttagatgaatcgagatttatccgtaactct
atctccaatgttaccagttctggattgataggaacagcattagcggcgatcgctgtcctt
ctcttccttggttccttacgacagacctttattatcgttatcgccatccctctagccacc
ctagccgccatcatcttgatggggttattcggcttatccatcaacgtctttagtttaggt
ggtttagccttgggcgtgggtatagtcgtagacaactccatcgtcatgttggagagcatt
gccgaaggcgtgggcatgactcctggtaaggatagtaaaagcagactcagtcacaagcaa
ctaattgctcaagcagaaaccagcagccaagaagtcgaatcggctctagttgcttctacg
agtacaaacttagtggcagtgttgccgtttttacttattggtggatttatagccttatta
tttaacgaactaattctcaccatcaccttttctgttgccgcttctatcgtcattgctgta
acagttgtgccaatgcttgcttctcgtttattaggctggaaattttccagtggcttgagc
aacttttggccattacgaaaattcaatgagcgttttgaagcagctacgagaggatatggt
agatttttagctggcatcttacgctggcgattagtcacagtagcgatcgccattctcctg
tttggtggtggtagtttatggatggctccccaaattccccaacaaatcctcccccgtatt
agtacaggacaagccagcttattcgctcagttcccacccggcacgcccttagagactaat
agcaaagtcatgagcgcggtggatgaaatcattcggcaacagccagaaacagaatatact
ttcacgactgccggtggtgctttatttggcactaataccaatgctaaccccttacgaggt
accagcaccatcaccctcaaaccaggcactaatgtagatacttatgtcgaacgagttacc
caagaattaaataaactaaatttagcaggtattcgtttacgcttggctcctggtcaagta
cggggtttaattaccaataactctcctgtacgcaatgccgacgttgatgtgattctccag
ggtactaatgcagacacattacaacaagccagccgtcaggtactagcagccttagaagaa
caagccacccaagtgagatttcgtcccgatgctgatgaacgacaaccagaaattcaaatc
ttgcccgactgggaaagagtttctgcattaggactaactactagagatatcggagacaca
attcagaccgccctagaaggcagcgtacccacacaactgcaacgcggcaaccgcttggta
gatgtgcgagtacagttaaatgagtcagcagtacaaacaggttcccaactacaaagacta
cctttatttgttggcaacaatcggcaagttcgcctcagtgatgtcgccaaaattgtcgaa
gcccaagcaccgggagagattcagcgtattaaccaacgccaagttatcatatttgccgga
aatttaactgaaggagctagtttaagtcgcgccatcgaacaggtaaataacgtcattagt
aacctagaattaccggaaggcgtaagtgttttaccaagcgccgccgcagaatccaatcgg
caactacaaagttcactgcaactattaggcggattagctagctttctcgttttcgtcgtc
atggcagtgcagtacaattccctcattgacccgctagtaattatgtttaccattccccta
gcactagcaggcgggattttcggactttacattaccaatactgccattggtgcaaccgtc
atcgtcggtgcagttctattagtgggaattgtcgtcaataatgccatcatcatggtggaa
ttggcaaatcaaatccgcgatcgcgacaaagttgatcgccgcactgccattttgcaagct
gcaccccaacgcttacgtcccatattaatgaccaccattactactgttttagggatgttt
cccctagcattaggaatcggtgaaggctcagaatttctccaaccattgggtgtagtagtg
ttttccggtttatccttagcaacattactcacactattcatcatcccctgcttttacacc
ctactccatgatttattgagtggagcttggagtaagccagtatttatttggtggcgggtt
tggaggaaaaggttcactttgtaa
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