KEGG   Trichormus variabilis: Ava_3052
Entry
Ava_3052          CDS       T00277                                 
Name
(GenBank) methionine synthase (B12-dependent)
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
ava  Trichormus variabilis
Pathway
ava00270  Cysteine and methionine metabolism
ava00450  Selenocompound metabolism
ava00670  One carbon pool by folate
ava01100  Metabolic pathways
ava01110  Biosynthesis of secondary metabolites
ava01230  Biosynthesis of amino acids
ava04980  Cobalamin transport and metabolism
ava04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:ava00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Ava_3052
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    Ava_3052
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Ava_3052
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    Ava_3052
   04980 Cobalamin transport and metabolism
    Ava_3052
Enzymes [BR:ava01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     Ava_3052
SSDB
Motif
Pfam: S-methyl_trans Pterin_bind Met_synt_B12 B12-binding_2 B12-binding CdhD
Other DBs
NCBI-ProteinID: ABA22662
UniProt: Q3M8M4
LinkDB
Position
complement(3783217..3786753)
AA seq 1178 aa
MTHPFLKRLHSPEFPVIVFDGAMGTNLQTQNLTAEDFGGVQYEGCNEYLVHTKPEAVAKV
HRDFLAVGADVIETDTFGATSIVLAEYDLADQTYYLNKKAAELAKSVAAEFSTPDKPRFV
AGSIGPTTKLPTLGHIDFDTLKTAFAEQAEALLDGGVDLLLVETCQDVLQIKAALNGIEE
VFAKRGERIPLMVSVTMESMGTMLVGSEINAVLTILEPFPIDILGLNCATGPDLMKPHIK
YLAEHSPFVVSCIPNAGLPENVGGQAHYRLTPMELRMALMHFVEDLGVQVIGGCCGTRPE
HIQQLAEIAKDLKPKVRQPSLEPAAASIYSTQTYEQDNSFLIVGERLNASGSKKCRDLLN
AEDWDGLVSMARSQVKEGAHILDVNVDYVGRDGVRDMHELVSRIVNNVTLPLMLDSTEWE
KMEAGLKVAGGKCLLNSTNYEDGEPRFLKVLELAKKYGAGVVIGTIDEEGMARTAEKKFQ
IAQRAYRQAVEYGIPPTEIFFDTLALPISTGIEEDRENGKATIESISRIRQQLPGCHVIL
GVSNISFGLSPASRMVLNSVFLHEATAAGMDAAIVSASKILPLSKIEDRHQEVCRQLIYD
QRQFDGDVCIYDPLTELTKLFEGVTTKRNKGVDESLPIEERLKRHIIDGERIGLEAQLTK
ALEQYPPLEIINTFLLDGMKVVGELFGSGQMQLPFVLQSAETMKAAVAYLEPFMEKSESG
NNAKGKVIIATVKGDVHDIGKNLVDIILSNNGYKVINLGIKQPVENIIEAYNQHKADCIA
MSGLLVKSTAFMKENLEVFNEKGINVPVILGGAALTPKFVHKDCQNTYKGKVIYGKDAFS
DLHFMDKLMPAKATGKWDNFLGFLDEVETEETEPTNSQSPVPNSQSPVPSPQSPVPVDTR
RSEAVAVDIPRPTPPFWGTQLLQPSDISLEEIFWHMDLQALVAGQWQFRKPKEQSKEEYQ
AFLNEQVYPILETWKQRIIAENLLHPQVIYGYFPCQSEGNTLYVYDSNSPNAKEITQFEF
PRQKSSRRLCIADFFAPKDSGIIDVFPMQAVTVGDIATEFAQKLFANNQYTDYLYFHGLA
VQVAEALAEWTHARIRRELGFGAEEPDNIRDILAQRYQGSRYSFGYPACPNIQDQFKQLD
LLETSRINLYMDESEQLYPEQSTTAIITYHPVAKYFTA
NT seq 3537 nt   +upstreamnt  +downstreamnt
atgactcatcctttcctgaaacgcctgcacagtccggaatttccggttatcgtcttcgac
ggtgcaatgggaactaatctacaaacccaaaacctcacggctgaggatttcgggggtgtg
cagtatgaaggttgtaacgaatacctagtccacaccaaacctgaagctgtcgccaaggtt
caccgcgactttctcgccgtgggtgcagatgttatcgaaactgatactttcggcgcgaca
tcgattgttttggcagaatatgatttagcagaccaaacgtattacctgaataagaaagct
gctgaattagcgaaaagtgttgctgctgaattctccaccccggataaaccccggtttgtc
gccggttccatcggccccacaaccaaacttcccaccttaggacatattgactttgacacc
ctcaaaactgcttttgctgaacaagcagaagcactgttagatggtggtgtggatttactt
ttggtggagacttgccaagatgtgctgcaaatcaaagcggcgctgaatgggattgaagaa
gttttcgccaagagaggggaacgcatacccctcatggtgtccgtgacaatggaaagtatg
gggacaatgttggtcggttccgaaatcaacgccgtcctgacaattttagaacctttccca
attgatattctcggtctgaactgtgccacaggcccagacttgatgaaaccacatattaaa
tatttggctgaacattcgccctttgtggtttcttgtattcctaatgcgggtttaccggaa
aacgttggaggtcaagcacactaccgcttaacaccaatggaattacgtatggcgttgatg
cactttgttgaagatttgggtgtccaagtgatcgggggttgctgtgggacacgtccagaa
cacattcaacaattggcggaaattgccaaggacttaaagccgaaggtgagacaaccaagt
ttagaacctgcggctgcatcaatatatagtactcaaacctacgaacaagataattctttc
ttgattgtgggtgaacgtctcaacgccagtggttccaaaaaatgccgtgatttgctaaat
gcggaagattgggacggattggtatcaatggcgcgatcgcaagtcaaggaaggcgcacat
atcctggatgtcaacgtggattatgtgggacgggacggtgtgcgagatatgcacgaacta
gtttcccgcattgtgaataatgtcacactccccttaatgctcgactccaccgaatgggaa
aagatggaggcgggattgaaggtagctggtggtaagtgtttgctaaactccaccaactac
gaagatggggaaccacgttttttaaaagtgctggagttggcaaagaaatacggtgctggt
gttgtcattggtacaatcgacgaagaaggaatggcgcggacggcagagaaaaagtttcaa
attgcccagcgtgcctatcgtcaagcggtagaatatgggattccccccacagaaatattc
tttgataccttagcgctaccaatttccacagggattgaagaagacagggaaaatggcaag
gcgacaattgaatcaattagccgtatccgtcagcaattgccagggtgtcacgttatttta
ggggtgtccaatatatcctttggcttgagtccagcttcccggatggtcttaaactctgtg
tttctccatgaagcaacggcagctggcatggatgcagcgatcgtcagtgctagcaagatt
ctaccactctcgaagattgaagaccgtcatcaggaggtatgccgccagttaatttatgac
cagcgccaatttgacggcgatgtctgcatctacgaccccttaacagaactaaccaaatta
tttgagggagtcaccaccaaacgcaacaaaggcgttgatgaaagcttacccatcgaagaa
cgcctcaaacgccacattatcgacggagaacgcattggtttagaagcgcaactgacaaaa
gccttagaacaatatccccccctagaaattatcaacactttcttactagatgggatgaaa
gtagtcggggaattgttcggttccggacaaatgcagctacctttcgttttacagtcagcc
gaaaccatgaaagcggcggtagcctacctagaaccgttcatggaaaaatcggaaagtggc
aataatgccaagggtaaagtaattattgccaccgtgaaaggcgatgttcacgacattggt
aaaaacctagtggatattatcttgtccaacaacggctacaaggtaattaacctgggaatt
aaacagccggtggaaaatatcatcgaagcttacaaccaacacaaagctgattgtattgcc
atgagtggcttgctagtaaaatccaccgcattcatgaaagagaatttggaggttttcaac
gaaaaaggcattaatgttcctgtaattttaggtggtgcggcattaaccccgaaattcgtg
cataaagattgccaaaacacctacaaaggtaaagtcatctacggcaaagatgctttctca
gacctacatttcatggataaattaatgccagccaaagccactggtaaatgggacaatttc
ttaggattcttggatgaagtagaaaccgaggaaacagaacctaccaattcccaatcccca
gtccccaattcccaatccccagtccccagtccccaatccccagtccccgtagacaccaga
cgttccgaagccgtagccgtagacatcccccgtcccacaccaccattctggggaacccaa
ttattacagcctagcgatatttccttagaagaaatattctggcatatggatttgcaagcc
ttggttgcaggacaatggcaattccgcaaacccaaagaacaatcaaaggaagaatatcaa
gccttcctaaatgagcaagtttatccaattttagaaacttggaaacagcgcatcattgca
gaaaacctgttacatccccaggtaatttatgggtattttccttgtcaatctgagggtaat
actttgtatgtttacgacagtaacagcccaaatgccaaagaaatcactcagtttgaattt
ccccgacaaaagtcatcaagaagattgtgcattgccgatttctttgcaccgaaagattcg
ggaatcatcgatgtcttccccatgcaggcggtgactgtaggagatattgctacagagttc
gcgcaaaaactgtttgcgaataatcagtacactgattatctttattttcacggtttagcg
gtgcaagtagcagaagccttggctgagtggacacacgccagaatccgccgtgagttaggg
ttcggtgctgaagaaccggacaatatccgggatattttggcacaacgctatcagggttcc
cggtatagttttggctacccagcttgtcccaatattcaagaccagtttaagcagctggat
ttgttggagactagccgaattaatttatacatggatgaaagtgagcaactttatccagaa
cagtctacaacggcgattattacctatcacccagtagctaagtactttacggcgtag

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