Trichormus variabilis: Ava_3580
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Entry
Ava_3580 CDS
T00277
Name
(GenBank) D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
ava
Trichormus variabilis
Pathway
ava00550
Peptidoglycan biosynthesis
ava01100
Metabolic pathways
ava01502
Vancomycin resistance
ava02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ava_3580
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ava_3580
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ava_3580
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ava01002
]
Ava_3580
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Ava_3580
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ava01504
]
Ava_3580
Enzymes [BR:
ava01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
Ava_3580
Peptidases and inhibitors [BR:
ava01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Ava_3580
Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Ava_3580
Antimicrobial resistance genes [BR:
ava01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Ava_3580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
DUF7262
YqfD
Motif
Other DBs
NCBI-ProteinID:
ABA23186
UniProt:
Q3M750
LinkDB
All DBs
Position
complement(4459066..4459875)
Genome browser
AA seq
269 aa
AA seq
DB search
MNKAGFSGEPHDPFDELSDDIPVALRDTPGITPKQRLQRLIFVMGAVGAFVILAIVSGFV
FFITTPRKTTESQPSPAIADATPIPTASNPADLQAVLGHLAYPEAPESELVPISRDGRIR
MRRTAAQRFQEMAQAARSAGVILLPISGFRSVKEQEQLFFAIGAQRNQTPAQRAALSAPP
GHSEHHTGYAVDIGDGAAPTTNLQAIFENTRAFKWLEANAARFGFEMSFPKDNSQGVSYE
PWHWRFVGDRNSLETFYKARNLKPVKTPQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagctgggttttctggagagccacacgacccatttgatgaacttagtgatgat
atcccagtagccttacgcgacactcctggtatcacacctaaacaacgcttacaacgcctg
attttcgtgatgggtgcagtaggcgcgtttgtgatactggcgattgttagtggttttgtt
ttttttatcaccacgcctagaaaaactactgagtctcagccttcgccagctattgctgat
gctacaccaatacctacagccagcaacccggctgatctgcaagctgtattaggtcatttg
gcttacccagaggctccagagtcagaattagtgccaatcagcagggatggacgcatccga
atgcgtagaactgctgctcaacggttccaagaaatggcacaggcagcgcggagtgcgggt
gtaattctattgcctatttcgggttttcgttctgtaaaagagcaagagcaattatttttt
gctatcggcgctcaacgtaatcaaaccccagcccaaagagcagctctcagcgctcctcct
ggtcatagtgaacaccacacaggttacgctgtggatattggggacggtgcagcacccaca
accaatttacaagctatttttgaaaataccagagcttttaaatggttagaggctaatgca
gctcgctttggctttgagatgtcttttcccaaggacaattctcaaggagtaagttatgaa
ccttggcactggcgttttgtaggcgatcgcaatagcctagaaacattctataaagctagg
aatttaaaacctgttaaaacaccgcaataa
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