Trichormus variabilis: Ava_3838
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Entry
Ava_3838 CDS
T00277
Name
(GenBank) Hydrophobe/amphiphile efflux-1 HAE1
KO
K18138
multidrug efflux pump
Organism
ava
Trichormus variabilis
Pathway
ava01501
beta-Lactam resistance
ava01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ava_3838
01503 Cationic antimicrobial peptide (CAMP) resistance
Ava_3838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_3838
01504 Antimicrobial resistance genes [BR:
ava01504
]
Ava_3838
Transporters [BR:
ava02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Ava_3838
Antimicrobial resistance genes [BR:
ava01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Ava_3838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
RNA_pol_Rpb1_7
TMEM220
Motif
Other DBs
NCBI-ProteinID:
ABA23443
UniProt:
Q3M6E3
LinkDB
All DBs
Position
complement(4774887..4778060)
Genome browser
AA seq
1057 aa
AA seq
DB search
MFVDFFIRRPVFTSVCAIIILLVGAISIPTLPTDRYPEISPTQIVVNANYTGASAEVVEN
TVTSILERQINGVQGMKYMTSSSSNDGTSTITVTFDPSRDKDIAAVDVQNRVSIAQPQLP
EAVQRTGVTVSKQSNNILLAMGLYSEQQEYDTVFLSNYADQYIVDALKRLDGVGEARIFG
ERRYAMRLWLDPNRLTSRKLTAQDVIDAINEQNIQVGVGQIGQQPSLPDQMYQIDLQARG
RLSEATEFADMVIKTGTDGTLIKLKDVGRAELGAENYSSFLRFRGNEGVGIGIFPTPGSN
ALEVSKAVKAEMARLAQSFPPGLKYQVAFDTTLFVEESLAEVVKTLIEALILVVLVIFLF
LQDWRTTLIPVITIPLTLIGTFAFIKVFGFSINTLTLFGLTLATGLVVDDAIIVVENISR
LIEEEGMSPRQAASESMRELFGAVIATSLVLMAVFVPVAFFPGTTGQIYKQFALTIAFSM
AISTFLALTLTPSLSALLLRRGQRPRGWLGKIFHQINRFLDWMRRGYERSLNILVKVRAI
VVLLFLASIALTGWVYLSVPTAFIPDEDQGYFITIIQGPEGVSLNYTSNVMAQVEKEILK
LPEVTGTFAIGGFSFSGNSANSGVIFTTLQPWDERQQPGQSAPEIIGKLAGVFANITEAR
IFPVSPPPINGLGNFGGFQFELQDRAGNSGLDNLLQVMGQIMMKGNQTPGLQGVFSTFSA
NTPQMLIDIDRNKVKALQVNVDDVFNTLQSYLGSRYVNDFNFQQRTYRVYVQADAPFRSN
PEDIGKLYVRSANDQMISLSNLVKITPATGAQTINHYNLFRSITINGAAAPGYSSGQATT
AMEKLAKEVLPASMGYEWSGITAEEQESGGQAPVIFGLGLVFVFLVLAAQYENYVDPLII
MLSVPLAILGALSAQWLRGLSNDVFCQVGLVMLIGLASKNAILIVEFANQLRERGLPIIK
ATVQASQERLRPILMTSLSFILGVWPLINPIGAGAASRKSLGTAVAGGMIVSTVLSLFVV
PILYIVISKIRDRFRPKPPHIPLDSTRDDKIPSTSHR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttgacttctttatcaggcgacctgtatttacaagtgtctgcgccattatcatt
ttgctggtaggcgcaatcagtatacccaccctacctactgatcgctatccagaaattagc
cctacacaaattgttgttaatgctaactacactggggctagcgcggaagtcgtggaaaat
acggtgacaagtatcttggagcgccaaatcaacggcgttcaaggtatgaagtacatgaca
tctagcagtagtaacgatggtactagcaccattaccgtcacctttgacccatcacgggac
aaagatattgccgccgttgatgtccaaaaccgcgtatctattgcccagccccagttacca
gaggctgtacaacgtactggagtcacagtcagcaaacagtctaacaatatcctgttagcg
atggggctgtatagcgaacaacaggaatatgacaccgtatttttaagtaactacgccgac
caatatatagtagatgccctgaaaaggcttgatggtgtgggcgaggcgcggatttttggt
gaacggcgctatgctatgcgattgtggcttgacccgaatcgtctaaccagtcgcaagctg
actgctcaagatgtaattgatgccatcaacgaacaaaacatacaggtaggggtggggcaa
attggtcagcagccgtccctgccagaccagatgtatcaaatagacttacaggctcgcggc
agactttccgaagcaacggaatttgccgacatggtaattaagactggaaccgatggcaca
cttatcaagctcaaagatgtgggtcgggcagaattaggggcagaaaattatagttcgttt
ctgcgattccgaggtaatgagggtgtgggtatagggatatttcctacccctggtagtaat
gctttggaagtatccaaggcagtaaaagccgaaatggctcggttagcacaaagctttccc
ccagggttgaaatatcaagtggcgtttgatacgaccctgtttgtggaagaatccctcgcg
gaagtggtcaagacactgatagaagccctgattctggttgtcttggtgatttttctcttc
ttgcaagactggcgtacaaccctgattccggtaattaccattcccttaactttaattggg
acttttgcctttatcaaagtctttggattttccattaacaccttaactttgtttggtttg
acattagctacggggttagtggtagacgatgcgattatcgtggtggaaaacatctcccgg
ttaattgaggaagagggaatgtcgccccgtcaggctgcatccgagtccatgcgggaactg
tttggggctgtaattgccacttccttagtgttgatggcggtatttgttcctgttgccttt
ttcccaggtactacaggacagatttataaacagtttgccctgaccatcgccttttcgatg
gctatttccacctttttggctctgacactcacaccctccctttcagccttattattacgt
cggggacagcgcccccgtggttggttaggcaaaatttttcaccagattaataggtttttg
gattggatgcgccggggatatgagcgatcgctcaatattcttgtgaaggttagggcgatc
gttgtcttattattcctagcttccatcgccttgacaggctgggtttatctcagcgtaccc
acagcatttatccctgacgaagatcaaggctatttcatcaccatcatccaagggccagaa
ggagtttccctcaactacaccagcaatgtcatggctcaggtggaaaaagaaatcctcaaa
ttaccggaagttacaggaacctttgccattggtggctttagttttagtggtaacagtgcc
aacagtggggtaatttttactaccctccagccttgggatgagcgccaacaaccaggacaa
tcagcaccagaaattattggcaagttggcaggagtcttcgccaacatcaccgaagccaga
attttccccgttagtcctccaccaatcaatggtttaggcaacttcggcggttttcaattt
gaactgcaagatagagcaggtaacagtggcttagataatctgctgcaagtcatgggtcag
atcatgatgaaggggaatcagactcctggtttgcaaggtgtatttagtacttttagtgct
aacacaccccagatgttaatagacatcgaccgcaacaaagtcaaagccttacaagttaat
gtagatgacgtgttcaacaccctgcaatcttacttgggttccaggtacgtcaacgatttt
aatttccaacaaagaacttaccgggtttacgtgcaagcagatgcgccatttcgctctaac
cctgaggatatcggtaagttatatgtccgctctgccaacgatcaaatgatttccctgagt
aacctagtgaaaattactccggcgactggagcgcaaacaatcaaccactacaacctattc
cgctcaattaccatcaacggtgcggctgcgcctggttatagttctggtcaagcaactaca
gcgatggagaaattagcaaaagaagttttacccgccagtatgggttacgaatggtcgggg
ataactgcggaagaacaagaatcaggaggtcaagcacctgtaatttttggattagggtta
gtctttgtttttctcgtgttggcagctcaatatgagaactacgttgacccattaattatt
atgctgtcagttcccctagctattttaggagccttatcagctcagtggctgcggggtctg
agtaatgatgtcttttgccaagtaggtttagtcatgttgattggcttggctagtaaaaac
gccattttgattgtggaatttgccaatcaattgcgcgaacggggcttgcccattatcaaa
gccacagtgcaagcatcacaagaaaggttgcgacctattctcatgacttccctatctttt
attcttggtgtctggccattgattaatcctataggagcaggtgcagcgagtagaaaatct
ctcggtacagccgtggcagggggaatgattgtctcaactgtgttgagtctatttgttgtc
cccattctctacatcgtaattagtaaaatccgcgatcgctttagaccaaaacccccacac
ataccactagattctacccgtgatgacaaaattccctcgactagtcatagatga
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