Azotobacter vinelandii CA6: AvCA6_03590 Help Entry AvCA6_03590       CDS       T02634                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism avd  Azotobacter vinelandii CA6 Pathway avd03030   DNA replication avd03410   Base excision repair avd03420   Nucleotide excision repair avd03430   Mismatch repair Brite KEGG Orthology (KO) [BR:avd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AvCA6_03590 (ligB)    03410 Base excision repair     AvCA6_03590 (ligB)    03420 Nucleotide excision repair     AvCA6_03590 (ligB)    03430 Mismatch repair     AvCA6_03590 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:avd03032]     AvCA6_03590 (ligB)    03400 DNA repair and recombination proteins [BR:avd03400]     AvCA6_03590 (ligB) Enzymes [BR:avd01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AvCA6_03590 (ligB) DNA replication proteins [BR:avd03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AvCA6_03590 (ligB) DNA repair and recombination proteins [BR:avd03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AvCA6_03590 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      AvCA6_03590 (ligB)    MMR (mismatch excision repair)     DNA ligase      AvCA6_03590 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AvCA6_03590 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  OB_DNA_ligase DNA_ligase_aden HHH_5 RNA_ligase DUF3701 Motif Other DBs NCBI-ProteinID:  AGK18205 UniProt:  M9YBM0 LinkDB All DBs Position complement(337991..339673) Genome browser AA seq 560 aa AA seqDB search MQRRIAFSLLLLLPFASPALADSACPDWTAQRAAAELAALAERLRQWDVAYHRDGRSPVA DELYDQARARLADWNRCFPGQADASPEPLAGSAGPLLHPVPHTGLAKLDEAAVRDWMATR EDLWTQPKVDGVAVTLEYADGRLRRAISRGDGRHGQDWTARVRRLPALPRQLAERRRLIL QGELYWRLPGHVQAEAGGRSARARVAGLLARDTLDDGDAAGIGLFVWDWPNGPADMRARL DGLERLGFAEARRYSRPVADFATARQWRERWYREPLPFASDGVVLRQGRRPPGERWRAEP PHWAVAWKYPLAQALAEVRAVRFRIGRSGRITPQLELQPVRLDDRQIRRVALGSLRRWRE LDVRPGDQVAIRLAGQSIPQVDAVVWRAAERPALPSPDPAAHHALSCWRPLPGCEEQFLA RLDWLGGRRGLDLRGVGRGTWEALLENGRLDDLLGWLELDEARLAELPGFGERSASLLAE RFRAARRRPFPMWLRALGLPPAGEATLPPSWDELAGRGPEQWQREPGIGPGRARQLQAFF AHPEVQALRQRLRAAGVEGF NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt atgcaacgccggatcgcgttttccctcctgcttctactgcccttcgcctcgcccgctctc gccgactccgcctgtccggactggacagcgcaacgcgccgccgccgaactggcggcgctc gccgagcgcctgcgccaatgggatgtggcctaccaccgcgacggccgctcgccggtggcc gacgaactctacgaccaggcccgcgcccgcctggccgactggaaccgctgctttcccggc caggccgacgcatctcccgagcccctcgccggcagtgccggccccctgctccatccggta ccgcacaccggtcttgccaaactcgacgaggccgcggtgcgggactggatggccacgcgc gaggacctctggacccagcccaaggtggacggcgtggcggtcaccctggaatacgccgac gggcgcctgcgacgcgccatcagccgcggcgacggccggcatggccaggactggacggcc cgggtccggcgcctgccagcgctgccgcggcaactggcggaaaggcgacgcctgatcctg cagggcgaactctactggcggcttcccggccatgtgcaggccgaagccggcggacggagc gcgcgggccagggtcgccggcctgctggcgcgcgacaccctggacgacggggacgccgcc ggcatcggcctgttcgtctgggactggccgaacggcccggcggacatgcgcgcgcgactg gacggcctggagcggctcggcttcgccgaggcgcgccgctacagccggccggtggcggac ttcgccaccgcgcggcaatggcgcgagcgctggtatcgcgagccgctgcccttcgccagc gacggcgtggtgctgcgccagggccgccgcccgccgggcgagcgctggcgggcggagccg ccgcactgggcggtggcctggaagtatcccctcgcccaggcgctggccgaggtgcgcgcg gtgcgttttcgcatcggccgcagcgggcgcatcacaccgcaactggaattgcagccggta cgcctggacgaccggcagatccgccgggtagccctcggctcgctgcgccgctggcgggag ctggacgtccgtcccggcgaccaggtggcgatccgcctggccggacagagcattccgcag gtggacgccgtggtctggcgcgccgccgaacgcccggcgctgccctcacccgatccggcc gcccaccacgcgctgagctgctggcggccgctgccgggctgcgaggaacagttcctcgcc cgtctcgactggctcggcggccggcgcggcctggacctccgcggagtcggccgcggcact tgggaggcactgctggagaacggtcggctcgacgacctgctcggctggctggagctggac gaagcgcgcctggccgagctgcccggcttcggcgagcgcagcgccagcctgctggccgag cgtttccgcgcggcgcgccggcgtcccttcccgatgtggctgcgggctctcggcctgccg ccggccggcgaggcgacgctgccgccctcctgggacgaactggccgggcgcggcccggag caatggcagcgcgagcccggcatcggccccggccgtgcccgccagttgcaggccttcttc gcgcatccggaggtgcaggcgctgcgccagcgcctgcgggcggcgggagtcgagggcttc tga

DBGET integrated database retrieval system