Agrobacterium vitis VAR03-1: RvVAR031_03560 Help Entry RvVAR031_03560    CDS       T08810                                  Symbol gdh Name (GenBank) NAD-glutamate dehydrogenase   KO K15371   glutamate dehydrogenase [EC:1.4.1.2] Organism avf  Agrobacterium vitis VAR03-1 Pathway avf00220   Arginine biosynthesis avf00250   Alanine, aspartate and glutamate metabolism avf00430   Taurine and hypotaurine metabolism avf00910   Nitrogen metabolism avf01100   Metabolic pathways avf01120   Microbial metabolism in diverse environments Brite KEGG Orthology (KO) [BR:avf00001]  09100 Metabolism   09102 Energy metabolism    00910 Nitrogen metabolism     RvVAR031_03560 (gdh)   09105 Amino acid metabolism    00250 Alanine, aspartate and glutamate metabolism     RvVAR031_03560 (gdh)    00220 Arginine biosynthesis     RvVAR031_03560 (gdh)   09106 Metabolism of other amino acids    00430 Taurine and hypotaurine metabolism     RvVAR031_03560 (gdh) Enzymes [BR:avf01000]  1. Oxidoreductases   1.4  Acting on the CH-NH2 group of donors    1.4.1  With NAD+ or NADP+ as acceptor     1.4.1.2  glutamate dehydrogenase      RvVAR031_03560 (gdh) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Bac_GDH_CD GDH_C GDH_HM3 GDH_HM1 GDH_ACT2 GDH_ACT3 GDH_ACT1 ELFV_dehydrog Motif Other DBs NCBI-ProteinID:  BCH52746 LinkDB All DBs Position 1:388229..393049 Genome browser AA seq 1606 aa AA seqDB search MVAAKRVKRDQLFELARSTAGENQPGLIDPAALFGRASDDDLQHYDAAMLRAAAIRASQD LQDWQGQDRQEKGAQVRIAPVEGIAADGASLSVLSIVDRNKPFLYDSVMGEVTSQFRDIH LTIHPILVQTEGRWALADTQTEASDRVSYIQLHLAPLNEDQAKGLAERLQSVVAQVGTVA SDWQPMISLLDSVMAELTEQSNVKRKTERAEAIAFLEWLRDDNFTFLGMREYLYSGEGSG ARLERDKGRGLGILSDPDVLVLRQGRNAVTTTPEILAFLQGPDDLIVTKANVKSVVHRRA YMDYIGIKRFDAAGKVVGELRVVGLFTATAYTHSVNHIPLLRAKVEKVTDQFNFDPLSHS GRILQNTLESYPRDDLFQIDTETLSRFCEQIMDLSERPRVRVLQRIDHFDRFVSLLVFVP REEYNSLVREKIGTYFTKIYDGRLSAYYPAFPEGGVARVHFIIGRSEGKTPRIAQNKLEE AVKAITARWDDRFASLAPPKSPQLVVSRAFEDAFSPEETVADLSHIQTCLSGAKASIAFH NRQTAEGQTLYLKVFHAGHHLPLSRRVPLLENLGFSVVSERTFDITVKGTGQAAGKTGDQ LVVLHDMELAVRAGQDFDIARHGARVEATFLAVFNGVVDNDAFNRLVLSTGLNVGEVAVL RAYAAYLRQAGLVYSLTYIAETLNKYPEITADLFTLFHQSFDPKLSEKSRPRKLAELRDG IETALASVPSLDEDRILRRYQNAVDSTLRTNYFQKSPSSQKNSSSNVKPMLAFKFDPQQL DGLPQPRPFREMFVYGVEVEGVHLRFGKVARGGLRWSDRAQDYRTEVLGLVKAQQVKNAV IVPVGAKGGFFPRQLPSPANREDYLRMGREAYMTYIRTLLSITDNIKDGAVVAPADTVRL DGDDPYFVVAADKGTATFSDTANGLAREAGFWLDDAFASGGSAGYDHKKMGITARGAWEA AKRHFREMGVDIQKTPFTVAGVGDMSGDVFGNGMLLSRKIRLIGAFDHRDIFIDPDPDME KSFQERKRMFGLARSSWQDYDKTLLSKGGMIISRTEKSVTLTPQAAEAIGLAKKVATPFE IMTAILKAPVDLLWFGGIGTYIKALSETDAEVGDRANDPIRITADEVGAKVIGEGANLGV TQKGRIAFSLKGGRCNSDAIDNSAGVNSSDVEVNIKIALSTAVSSGRLDLPARNKLLASM TEEVGELVLRNNYLQSLAISLVARQGSANRDELSRLMTVLEASGRLNRKVETLPDDAALA ERYAGGQSLTRPEIGVLLSYAKISLFDDLVETSLPDDPYCASILSNYFPKKMRRPYADDI ATHRLHREIIATVLANHIINRGGPGFMAWMSDATGGTAEDIARAALLTRDGLDLRAYWDR IDALDGEISGEAQNDLYQRVATVYRVFTKLAIDTRLAAGDLSDVVRKLKSAIKSFKGFSR SVTPADFSAQISAEASTMTAAGVPEDLAEDLAELWSLTVTPEVISVALRADASLQKATES YYKVSEIFRIGRLLASVEKIPTSDHYDSLARLRSLDLVLKARRNIIVQALTQHGDSRDPV AAWRSADALRINRLGSELIALTEGDPSLSRLTVAASLLTDIAQGAA NT seq 4821 nt NT seq  +upstreamnt  +downstreamnt gtggttgcagcaaaacgggtaaaacgggaccagctttttgagcttgccagatccacagcc ggagaaaaccagcccggtctcattgatccggccgcccttttcggacgcgccagcgatgac gatctccagcattacgatgccgcgatgcttcgggccgcagcgattcgcgccagccaggat ctgcaagactggcaggggcaagacaggcaggagaagggagcgcaggtgcgcattgccccg gtcgaaggcatcgccgccgatggtgcaagcctcagcgtgctgtccatcgtcgatcgcaac aagccgtttctctacgattctgtcatgggcgaggtcacgagccagtttcgcgatattcat ctcaccatccatccgattctggtccagacggagggtcgctgggcactcgccgacacccaa accgaagccagcgaccgggtcagctatatccaactgcatctggcacccttgaacgaggat caagccaaggggctcgcggagcggctccagtccgtcgttgcccaggtcggcaccgttgcc agtgactggcagccgatgatctcgctgctcgacagcgtcatggccgaattgactgagcag tccaatgtcaagcgcaagacggaacgggccgaagccatcgcctttctggaatggctgcgc gacgataatttcaccttcctcggcatgcgcgaatatctctattccggcgaaggcagcggt gccaggctggaacgcgacaaaggccgtggactgggcatcctctccgatcccgatgttctg gtgctgcgccagggccgtaatgccgtgacgaccacgccggaaatcctggcctttcttcag gggccggatgacctgattgtcaccaaggccaatgtcaaatccgtggtgcatcgccgcgcc tatatggattatatcggcatcaagcgcttcgatgccgcaggcaaggttgtcggtgagttg cgggtcgtcggcctgttcacagccaccgcctatacccattccgtcaatcacattcccctg ctgcgcgccaaggtcgagaaggtcaccgaccagttcaatttcgacccattgagccattcc ggacggatattgcagaacacgctggaatcctatccccgcgatgacctgttccagatcgat accgaaacgctttcgcgcttctgcgagcagatcatggatctgagtgagcggccaagggtg cgcgtgctgcaacgcatcgatcatttcgaccgcttcgtctcattgctggttttcgtgccg cgcgaggaatataattcgctggtgcgtgagaagatcggcacctatttcaccaagatctac gatggccgcctctcggcttattatccggctttcccggaaggtggcgtggcacgggtgcat ttcatcatcggccggtcggaaggcaagacaccgcgcatcgcccagaacaagctggaagaa gcagtcaaggccatcaccgcccgatgggatgaccgcttcgccagccttgcgccgccgaaa tcgccgcaactggtcgtcagccgcgctttcgaggatgcgttttcaccggaagagactgtc gccgatctcagccatatccagacctgcctgtccggtgcaaaagcctccattgccttccac aacaggcagacggcggaaggccagacgctgtatctcaaggtgtttcacgccggtcatcac ctgccactgtcgcggcgcgtgccgctactggaaaatctcggcttcagcgtcgtcagcgag cgaaccttcgacattacggtcaaaggtactggccaagccgctggcaagaccggggatcag ctggtcgttctgcatgacatggaactggcggttcgcgctggccaggatttcgacattgcc cggcatggcgcccgtgtggaggccacgttccttgccgtcttcaacggcgtggtcgacaac gatgccttcaaccggctagtgttgagcactgggctgaatgtcggcgaagtggctgttctg cgcgcctacgccgcctatctgcgccaggcgggcctggtctattccctcacctatattgcc gaaacactgaacaaatatcctgagatcaccgccgatctcttcaccctgttccaccagtct ttcgatccgaagctttctgaaaaatcgcgtccgcgcaaactggcggaactgcgcgacggc atcgagacggcgctcgcctccgtgccgagcctggatgaggaccgcatcctgcggcgttac cagaacgctgttgattcgactctgcgcaccaattatttccagaaaagcccctcttcgcag aaaaacagcagcagcaatgtcaagccaatgctggctttcaaattcgatccacaacaattg gacggcctgccgcaaccgcgcccgttccgggaaatgtttgtctatggggttgaggtcgag ggcgtgcatctgcgcttcggcaaggttgcccgtggtggcttgcgctggtcggaccgcgcc caggattatcggaccgaagtgcttggcctggtcaaggcgcagcaggtcaagaatgcggtg atcgtgcctgttggcgccaagggcggcttcttcccccggcaattgccaagccccgccaat cgcgaagactacctgcggatgggccgtgaagcctatatgacctatatccgcacgctgctg tcgatcaccgataatatcaaggacggcgcggtcgtcgcccccgccgatacggtgcggctg gatggagacgacccctatttcgtcgtcgctgcggacaaaggcaccgcaaccttttccgat acggccaacggtctggcccgcgaggccgggttctggctggacgatgccttcgcgtcgggc ggctctgccggttatgaccacaagaaaatgggcatcaccgcccgaggtgcctgggaagct gccaagcggcatttccgcgaaatgggtgtcgatatccaaaagacacccttcacggtcgca ggcgtcggtgacatgtcgggagacgtgttcggcaatggcatgctgctgtcacgcaagatc cggctgatcggcgccttcgaccaccgggacatttttatcgaccccgatccggacatggaa aaatccttccaggaacgcaagcggatgttcggcctcgcccgctccagctggcaggattac gataagacactgctatctaagggcgggatgatcatttcgcggacggaaaagtccgtcacc ttgacgccacaagccgctgaggcaatcggccttgccaagaaagtggcgacaccgtttgaa atcatgaccgcgatcctgaaagcgccggtcgatctgttgtggttcggcggtatcggcacc tatatcaaggcgctgtcggaaactgacgcagaagtcggcgaccgtgcgaacgacccaatc cgcattaccgcggatgaggtcggcgccaaggtgatcggcgaaggcgccaatctcggcgtc acccagaagggccgcatcgccttttcgctgaagggcggacgctgcaattccgacgccatc gacaattcggcgggcgtcaattcctccgacgtcgaggtcaatatcaagattgccctgtca acggcggtatcaagcggtcgcctcgatctcccggcccgcaacaaactgctggcctcgatg accgaggaggtcggcgagttggtactgcgcaacaactacctccaatccctggcgatttcg ctggtggcgcgccagggcagcgccaatcgcgacgagctatcccggttgatgaccgtattg gaggcttctggccggctgaaccgcaaggtggaaaccctgccggatgatgcggcactggcc gagcgctatgctggtggccaatctctgacgcggccggaaatcggtgtgcttctgtcctat gccaagatttccttgttcgacgatctggtcgaaaccagtctgccggacgatccttattgc gccagcattctcagcaattacttcccgaagaaaatgcgccggccttacgccgatgacatt gccacccaccggctgcatcgcgaaatcattgcgactgtgctggccaaccacatcatcaac cgtggcggcccaggcttcatggcgtggatgagcgacgcgactggcggcacggcggaggac attgccagagctgctcttctgacccgcgatgggctggatctgcgggcctattgggaccgg atagatgccctggacggggaaatttcaggcgaagcacagaacgatctctaccagcgggtc gccacggtctaccgcgtcttcaccaaactggcgattgatacacgattggccgccggtgac ctgtcggatgtggtgcgcaagttgaaaagcgcgatcaaatctttcaagggcttcagccgc tcggtcacgcctgccgatttctcagcgcagatcagtgccgaggccagcaccatgaccgct gcgggcgtgccggaggatctggccgaggacctcgccgaattgtggagcctgacggtcacc ccagaggtgatttccgtcgcacttcgggccgatgccagcctgcaaaaggcaacggaaagc tattacaaggtcagcgaaatcttccggattggcaggctgctggcgtcggtcgaaaaaatt ccgaccagcgaccattacgacagtctggcccggctgcgcagcctggacctggtgctgaag gcgcggcgcaatatcatcgtccaggccctgacccagcacggggatagccgcgatccggtt gccgcttggcggtctgcggatgcgttgcggatcaacagattgggcagcgaattgatcgcg ctcacggaaggcgatcccagcctgtcgcgcttgaccgttgccgccagcctgctgacggac atcgctcaaggtgctgcgtga

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