Agrobacterium vitis VAR03-1: RvVAR031_21890
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Entry
RvVAR031_21890 CDS
T08810
Symbol
cobQ
Name
(GenBank) cobyric acid synthase
KO
K02232
adenosylcobyric acid synthase [EC:
6.3.5.10
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00860
Porphyrin metabolism
avf01100
Metabolic pathways
avf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RvVAR031_21890 (cobQ)
Enzymes [BR:
avf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.10 adenosylcobyric acid synthase (glutamine-hydrolysing)
RvVAR031_21890 (cobQ)
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Gene cluster
GFIT
Motif
Pfam:
GATase_3
CbiA
AAA_26
Motif
Other DBs
NCBI-ProteinID:
BCH54579
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Position
1:complement(2387711..2389165)
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AA seq
484 aa
AA seq
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MTRMVMLQGTGSDVGKTVLVAGLCRLARLHGRVVLPFKPQNMSNNAAVADDGGEIGRAQW
LQALACGVPSSVHMNPVLLKPQSEIGSQIIVQGRVFGQAKGRDYQRLKPQLLGAVLDSFE
EIKAGADLVIVEGAGSPAEINLRAGDIANMGFATRANVPVVLVGDIDRGGVIASLVGTHA
ILPEEDRRMICGYIINKFRGDQSLFADGIGAITQYTGWPSFGIVPWLKAAGRLPPEDSVA
LERLSRRSTGALKIAVPVLSRIANFDDFDPLATEPSVDLVYVRPGEPLPADAALVILPGS
KATIGDLADLRAQGWDKDLALHRRRGGRIIGICGGYQMLGNSVADPLGLEGAPCRVDGLG
LLDIDTEMAPEKTVRNSAAHSLEYDVALSGYEIHLGQTDGPDCQRPALTIRGRADGAVSA
DGKVMGTYLHGLFANDSYRAALLQSFGISNTTENYRQSVEQALDDLAHELESVLDKAWLD
RLIG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggatggttatgctccagggcaccggctcggatgtcggcaagacggtgctggtg
gcggggctttgccggttggcacggctgcatgggcgtgtcgtgcttccgttcaagccgcag
aacatgtccaacaatgctgccgtggctgatgatggcggggaaatcggcagggcgcaatgg
ctccaggcgttggcctgtggcgtgccatcctcggtgcatatgaacccggttttgctgaag
ccgcaaagtgagatcggcagccagatcatcgtgcaaggccgcgtgtttggccaggcgaag
ggccgcgattaccagcggctgaaaccgcaattgctgggtgccgtactcgacagtttcgag
gagataaaggccggggccgatctggtgattgtcgagggtgccgggtctccagccgagatc
aatctgagggcaggcgacatcgccaatatgggttttgccacccgcgccaatgtgccggtg
gtgctggtcggggatatcgatcgcggcggggtgattgcctcgctggtcggcactcatgcc
atcctgccggaggaagaccgccggatgatttgcggctatatcatcaacaagttccggggt
gaccagagcctgtttgccgatggcatcggagccattacccaatatacgggatggccgagt
ttcggcatcgtgccttggctgaaggccgctggccgcttgccgccggaagacagcgtggcg
ctggaacgattgagccgcaggtcgacgggtgctttgaagattgccgtgccggttctgtcg
cgtattgccaatttcgacgatttcgatccgcttgccacggagccttccgttgatctggtc
tatgtgcgtcctggcgaacccttgcccgctgatgcggcgctggtgattctgccggggtcc
aaggcaacgattggcgatctggcggatctgcgcgcgcaaggatgggacaaggacctcgcc
ttgcatcgtcggcgtggcgggcggatcatcggcatttgcggcggttatcagatgctgggc
aatagcgtcgccgatccgctggggctggagggagcaccttgccgcgtcgatggcctcggt
ctgcttgatatcgacactgagatggcgccggaaaagaccgtgcgcaacagcgccgcccat
tcgctggaatatgacgtggccctgagtggctatgaaatccacctcggccagaccgatggc
ccggattgccagcgtcctgccctgacgatccggggccgcgccgatggggccgtttccgct
gatggcaaggtgatggggacttatctgcacgggctgtttgccaatgacagctaccgggcc
gcattgctgcaaagcttcgggatcagcaatacgaccgaaaattaccggcagagcgtcgaa
caggcgctggacgatctggctcacgagttggaaagcgtgctggacaaggcctggctggat
cggctgatcggctga
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