Agrobacterium vitis VAR03-1: RvVAR031_22330
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Entry
RvVAR031_22330 CDS
T08810
Symbol
cobJ
Name
(GenBank) precorrin-3 methylase CobJ
KO
K13541
cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:
3.7.1.12
2.1.1.272
2.1.1.131
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00860
Porphyrin metabolism
avf01100
Metabolic pathways
avf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RvVAR031_22330 (cobJ)
Enzymes [BR:
avf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.131 precorrin-3B C17-methyltransferase
RvVAR031_22330 (cobJ)
2.1.1.272 cobalt-factor III methyltransferase
RvVAR031_22330 (cobJ)
3. Hydrolases
3.7 Acting on carbon-carbon bonds
3.7.1 In ketonic substances
3.7.1.12 cobalt-precorrin 5A hydrolase
RvVAR031_22330 (cobJ)
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GFIT
Motif
Pfam:
CbiG_C
CbiG_N
TP_methylase
Big_9
CbiG_mid
Motif
Other DBs
NCBI-ProteinID:
BCH54623
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Position
1:complement(2435154..2437022)
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AA seq
622 aa
AA seq
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MTTPQKSGLEKNGAEKTGNAKPAIVILMPTALALARRIAVAVGGEVHAAASRVDGADQTF
DDVKSHVRALFSAGRPIIAVMASGALIRLLAPLLTDKRSEPPVLCVSEDGASVVPLLGGH
HGANDIARAVAEVLNAHAAITTAGDLRFGVALDAPPEGYALANREQAKTVMAELVAGASV
RLVGDADWLTASRLAFHDEGKVTLTVTDQRWTAGPLELVYHPQILVLGMGCERHASVEEA
IALAQQALDISGLAAQSLGAVASIDVKADEAAIHAVAKHFGVAARFFSAERLEQERPRLQ
NPSDVVFAEVGCHGVAEGAALAVAGSDGVLVLPKIKSKGVTAALGRSAQPIKVENLGRAR
GTLFVVGIGPGSDGWRSPEVSRMVAASSDLVGYSLYLDLLGSLTDGKARHDFDLGKEEAR
VVHAMELAGEGKTVALVCSGDAGIYAMATLVFELLDKGGISAGAQRIEVQVSPGISALQA
AAARIGAPLGHDFCTISLSDLLTPWEHIQRRVKAAGEGDFVIAFYNPVSMKRRTQLAYAR
DQLLTYRPADTPVILATNLGRPGETVRVVPLAGLNVDDVDMLTVVIVGSSESRTVKTGDG
KTWVYTPRGYSGKADTAMQKDA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcctcaaaaaagcggccttgaaaaaaacggcgctgaaaaaaccggtaatgca
aaacccgctattgtcattttgatgccaacggcgctggccttggcgcggcgcattgccgtg
gccgttggcggtgaggttcacgccgccgcatcccgtgtggatggggcggatcagaccttt
gacgatgtgaaaagccatgtcagggcgttgttttctgcgggccgtccgatcattgcggtc
atggcatcgggggcgttgatccggctgctggctccattgctcaccgacaaacggtcagaa
ccgccggtactctgcgtctccgaggatggcgcttctgtcgtgccactgctgggcggccat
cacggtgccaatgacattgcgcgggcggtggccgaggttctgaatgcccatgcggcgatc
accacggcgggcgatctgcggttcggtgtggcgctggatgcgccgcctgagggctatgcg
ctggccaatcgcgaacaggccaagaccgtcatggccgaactggtggccggggcaagcgtc
cgcctggttggcgatgcggattggctgacggcttcccgccttgcttttcacgacgagggc
aaggtgaccctgaccgtcaccgatcagcgctggacggcggggccgctggagctggtctat
caccctcaaatcctggttttgggcatgggctgcgagcgccatgcatcggtggaagaggcg
attgcgctggcgcagcaggcactcgatatatcgggtcttgcggcccaaagcctcggcgcg
gttgcctctatcgacgtcaaggccgatgaggcggcaatccatgcggtggccaagcatttc
ggcgtcgccgcccggttcttttccgccgaacggttggagcaggaacgcccccgtctgcaa
aacccgtcggacgtggtgtttgccgaagtcggttgccacggtgtggcggagggtgctgcg
ctggcggtggccggttcggatggggtgctggttctgcccaagatcaaatcgaaaggcgtc
accgctgcgcttggccgcagcgcacagcccatcaaagtcgaaaaccttggccgcgcccgt
gggacattgttcgtggttggcatcgggccggggtctgacggttggcgctcgccggaagtc
tcccgcatggtggcggcttcgagtgatctcgttggctattcgctttatctcgacctgttg
ggatcgctcactgatggcaaggcgcggcatgatttcgaccttggcaaggaagaagcccgc
gtggtccatgcgatggaactggcgggcgagggcaagacggtggcgctggtctgttccggc
gatgccggcatttatgccatggcaacgctggtgttcgagctgttggacaagggcggaatt
tctgcgggcgcgcaacggatcgaggtgcaggtttcaccgggtatttccgcgcttcaggct
gccgccgcccggatcggcgcgccgcttggccatgatttctgcaccatttcgctatcggac
ctgttgacgccctgggagcatatccagcgccgggtgaaggcagcgggcgagggcgatttt
gtcatcgccttttacaatccggtatcgatgaagcggcgcacgcagctggcctatgcccgc
gaccagctactcacctatcgcccggctgacacaccggtcattctcgccaccaatcttggc
cgtcctggcgagacggtgcgggtcgtgccactggctggcttgaatgtcgatgatgtcgat
atgctgacggtggtcatcgtcggttcgtcggaaagccgcactgtcaaaaccggtgacggc
aagacctgggtttacacgccgcgcggctattccggcaaggcggatacggcaatgcagaag
gacgcatga
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