Agrobacterium vitis VAR03-1: RvVAR031_27630
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Entry
RvVAR031_27630 CDS
T08810
Name
(GenBank) hemolysin secretion protein D
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf01501
beta-Lactam resistance
avf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RvVAR031_27630
01503 Cationic antimicrobial peptide (CAMP) resistance
RvVAR031_27630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avf03036
]
RvVAR031_27630
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_27630
01504 Antimicrobial resistance genes [BR:
avf01504
]
RvVAR031_27630
Chromosome and associated proteins [BR:
avf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RvVAR031_27630
Transporters [BR:
avf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RvVAR031_27630
Antimicrobial resistance genes [BR:
avf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RvVAR031_27630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Gp38_E217
HlyD_2
PYNP_C
Motif
Other DBs
NCBI-ProteinID:
BCH55153
LinkDB
All DBs
Position
1:3025263..3026471
Genome browser
AA seq
402 aa
AA seq
DB search
MHVRPIILVMALLLSVSQGFFIPAANAQSPAPAASTDAQLPAIVVAKASTQSLTDKVIGT
GSIKAVEEIYIQPEVDGIAIRNLLADVGDKVKAGQVLATLDGDSLILQKAQYAANQAKAE
ASLAQYKIQLIDAQASAAESERQLARGQSLVSGGTISTAQVQQYETSAINARNKVDSARQ
SIAIAEAELKVVISQVADLNLKLARTDIKAPFGGLITARNARIGAIAAGSGQPLFTIIRD
SKIELVAEVSESDMQKMRIGQPAEIAIAGQATPISGHVRLISPAVSPTTRLGEVHILLDD
SDAARQGMYASALITITSASGIALPLSAIDSGKAGSFTRIVENGVVRQVKIETGIIENGF
ILVTSGVKPGDLVVLKAGAFVRDGDKVRPVLETVSQTGAISN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgtgagaccgatcatcctcgttatggcgctgctgctatcggtcagccagggcttt
ttcatacctgccgcgaacgcgcaatctcccgcacccgcagccagcaccgatgcccagctc
ccggccatcgtcgttgccaaagccagcacccagagcctgaccgacaaggtgatcggcacc
ggcagcatcaaggcggtggaggaaatttacatccagcctgaagtggatggaatagccatt
cgcaatctcctggccgatgtcggcgacaaggtgaaggcgggtcaggtcctggcgacgctg
gacggcgacagcctgatcctgcaaaaggcgcagtatgccgccaaccaggccaaggccgag
gcctctcttgcccagtacaagatccagttgattgatgctcaggccagtgccgcagaatcg
gaacggcaattggcgcgcggccagtcgctggtctcgggcggcacgatttccactgcccag
gtccagcaatatgagacctccgccatcaatgcccgcaacaaggtggacagtgcccgccag
tccatcgccattgccgaggccgagttgaaagtggtgatcagccaggtcgccgatctcaac
ctgaaactggcccgcaccgatataaaggcgccgttcggcgggttgatcaccgcgcgcaat
gcccgcatcggcgccatagctgccggctccggccagccgctgttcaccattatccgcgat
agcaagatcgagttggtggccgaagtgtccgaaagcgatatgcaaaaaatgcggatcggc
caaccggccgaaatcgccattgccggacaggcaacgccgatcagcggccatgtgcggctg
atctctcccgccgtcagccccacgacgaggctcggtgaggtgcatattctgctcgatgat
agcgatgccgcccgtcagggcatgtatgccagcgccttgatcaccatcacctccgcctca
ggcattgccctgcccttgtccgcaatcgatagcggcaaggccggaagctttacccgcatt
gtggagaacggtgtggtccggcaggtgaaaatcgagaccggcattatcgaaaacggcttt
attctggtgacatcaggcgtcaagccgggcgatctggtggtgctgaaagcaggcgctttc
gtgcgcgatggcgacaaggtcaggccggtgctcgaaaccgtgagccagaccggcgcaata
tccaactga
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