Gillisella vitis VAR03-1: RvVAR031_32040
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Entry
RvVAR031_32040 CDS
T08810
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
avf
Gillisella vitis VAR03-1
Pathway
avf01501
beta-Lactam resistance
avf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RvVAR031_32040
01503 Cationic antimicrobial peptide (CAMP) resistance
RvVAR031_32040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_32040
01504 Antimicrobial resistance genes [BR:
avf01504
]
RvVAR031_32040
Transporters [BR:
avf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RvVAR031_32040
Antimicrobial resistance genes [BR:
avf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RvVAR031_32040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BCH55594
LinkDB
All DBs
Position
1:3524657..3527791
Genome browser
AA seq
1044 aa
AA seq
DB search
MSKFFIRRPIFAWVIAIVIMLGGGLAITSLSISQYPEIAPPSVKISATYTGASADTVKKT
VTQIIEDGMTGLDGLTYMTSSSTSGSSSITLTFDNSIDPDMAQVQVQNKLQLVESQLPSV
VQNLGIEVTKSTSSILLVGALVSTDGKRTSADLGDIFSAQIEDQVKRLEGVGNINAFGSA
FAMRIWLDPFKLRKFQLTPADVTSAIEAQNTQVSVGSVGGLPSVEGQQINITMTAQSQLT
TVSDFERIILKVDTSGANVRLSDVARVEIGQESYTSTSRSNRKAASGFAVNLATGANALD
TASRVKAKLAQIAPALPQNVSIIYPYDTTPFVSLSIEKVVHTLIEAIVLVFFVLLIFLQN
LRATFIPMIAVPVVLLGTFGILALTGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIMS
EEGLPPLEATQKSMGEITGAIIGIALVLTAVFVPMAFFGGSTGIIYRQFSVTIISAMLLS
AVVALVLTPALCATILKPIDKNHKKTTGPAAWFNRNFDRTTNGYVWSIGHLLRRPLRLLL
IFAVLVGGCAWLFLRLPSSFLPQEDQGVLMTIVQLPNGSTSAQTGEVMKKVEDYLLDKES
SVVDSVFAVNGFSFNGSGQNYGLVFAKLKDFDLRKKPEMAAGAIVQRAMGYFMTIREAQV
FPILPPAIQGMGNSSGFSLYLVDNGNHGSEALSIAAKQLLAQANSSGLITAMRPNDRDEE
SQVKLVLDQEKLSAMGVTISDANSMLTTIFAGTNVNDFTLNNKIKKVYVQGDAPYRMQAE
DIKYWDARNSSSEMVPFSSFTDAKWVNGLPSISAFNAVTAFSLDGSAAPGVSSGDAMNEV
ERLVSKMDGGYTVAWQGISYQERLSGSQAPLLYALSVLIVFLCLSALYESWSIPFSVIMA
VPIGVLGAVAAATLMGQDNDVYFKVGLLTTIGLAAKNAILIVEFAKERQEHGLSLMDATL
EAARLRLRPIIMTSLAFILGVVPLAIATGAGSAAQNAIGIGVLGGMLSATLLGIFFVPSF
FVIVRRASNRAKAKEELLQVEQKR
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaattcttcatacggcgaccgattttcgcctgggtgatcgcgatcgtgatcatg
ctgggcggcgggctggctatcaccagcctgtcgatttcgcaatatccggaaatcgcacca
ccatccgtaaaaatcagcgccacctatacaggtgccagcgccgataccgtcaagaagacg
gttactcagatcattgaggacggaatgaccgggctggatggcctgacatatatgacctct
tcatcgacgtctggatcgtcatccatcacgttgaccttcgacaacagcatcgatccggac
atggctcaggtccaagtccagaacaagctgcaactggtggaatcgcaattaccgtccgtg
gtgcagaatctcggcatcgaagtgacgaaatcgacctccagtattctgttggttggcgct
cttgtgtccacggatggcaagcgcacatcggcagacctcggcgatatcttttccgcccag
attgaagaccaggtgaaacgcctggaaggcgtcggcaacatcaatgccttcggctccgcc
tttgccatgcgcatctggctcgaccccttcaagctgcgcaagtttcagctgacccctgcc
gatgtcacatcagccattgaagcgcagaatacgcaggtctccgttggctcggtcggcggc
cttccatccgtcgaaggacagcagatcaatatcaccatgacggctcagagccagcttacc
actgtgtcggactttgagcggatcattttgaaagtcgataccagcggtgccaatgtccgt
ttgagcgacgtggcccgtgttgaaatcggccaggagagctatacatccacgtcgcggtca
aaccgtaaggcggcatccggcttcgcggttaaccttgcaacgggagcgaatgctctcgat
acggcctcccgtgtgaaggccaagctggcgcagatcgctccagcattgcctcagaatgtc
agcatcatctatccctacgacacaacgcctttcgtatcactttcgatcgaaaaggtcgtt
catacgctgattgaagccatcgtcctcgtcttcttcgtcttgttgatctttctacagaac
ctccgggcgacattcattccgatgatcgccgtgcccgtcgttttgcttggtacgtttggc
attctggcgctgacgggatattcgatcaacacactgaccatgttcgccatggtgcttgcc
atcggccttctcgtcgatgatgccatcgtcgtggtggaaaatgtcgagcgcattatgtcc
gaagagggtcttcctcccctggaggcgacccagaaatccatgggcgaaatcactggcgcc
atcatcggcatcgctctggtgctgacggccgtattcgttcccatggcgttttttggtggc
tcgaccggcattatctatcgtcagttttcggtcaccatcatttcggcgatgctgctttct
gcggttgtcgcactcgtcctgacacctgcgctgtgcgcgacgatactgaaaccgatcgac
aagaatcataagaagacgaccggaccagccgcatggttcaatcgcaatttcgaccgcacg
accaatggctacgtctggtccattggtcacctgctgaggcgcccgctccggcttctgttg
atattcgcggtattggtcggcggttgcgcctggctgttcctgcgcctgccatcctccttc
ctgccgcaggaagaccagggcgtactgatgacgatcgtccagctcccgaatggctcgacc
tcggcacagacgggcgaagtgatgaaaaaagtcgaggattatctgctcgacaaggaaagc
agcgttgtcgattcggttttcgccgtcaatggtttcagcttcaacggcagtggtcagaac
tacggtctggttttcgccaagctgaaggatttcgacctgcgcaagaagccggagatggcc
gctggcgccatcgtccaacgcgcgatgggctatttcatgaccattcgtgaagcgcaggtc
tttccgatcctgccacctgccattcagggcatgggcaattccagcggtttctccttgtat
ctcgtcgataacgggaaccacggctcggaagcattgtctatcgccgcgaaacaattgctg
gcacaggccaatagcagcggccttatcaccgccatgcgcccgaacgaccgcgatgaggaa
agtcaggtcaagcttgttctcgaccaggaaaagctcagcgccatgggcgtaacgatttcc
gacgccaactcaatgctgacgaccattttcgctggcaccaatgtcaatgacttcacgctg
aacaacaagatcaagaaggtctatgtgcaaggcgatgccccgtatcgtatgcaggctgag
gacataaaatattgggatgcccgcaattcgagcagtgagatggtgcccttctcatcgttc
acggacgcaaaatgggtcaacggacttccttcgatttcggctttcaatgctgtcaccgcc
ttctcgctcgacggttcggcggcacccggcgtcagctccggtgatgccatgaacgaagtg
gagcggctggtttccaagatggatggcggctacaccgtcgcctggcagggcatctcctat
caggaaagactgtcaggctcgcaggcgcccttgctctacgccttgtcggtgttgatcgtc
ttcctatgcctctcggcactctacgaaagctggtcgatccccttctcggtgatcatggcc
gtgccgattggtgttcttggcgccgttgcggcagcaaccctgatggggcaggacaacgac
gtctacttcaaggtcgggctgctcaccacaatcggtctggcggcaaagaacgccattctg
atcgtcgagtttgccaaggaacggcaggagcacggattaagcctgatggatgcgaccctg
gaggcggcaagactacgtcttcggccgatcatcatgacatcgctcgccttcattcttggt
gtcgttccactggcaatcgccactggcgcgggctctgcggcgcagaatgcaatcggcatc
ggcgtactcggtggtatgctttctgcaacactgctcggaattttctttgttccatccttt
tttgtcattgtcagacgcgcttcaaaccgtgcaaaagccaaagaagagctgttacaagtt
gagcagaaacgatag
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