Agrobacterium vitis VAR03-1: RvVAR031_41290
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Entry
RvVAR031_41290 CDS
T08810
Name
(GenBank) 3-keto-5-aminohexanoate cleavage protein
KO
K26400
3-dehydroshikimate dehydratase [EC:
4.2.1.118
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00400
Phenylalanine, tyrosine and tryptophan biosynthesis
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
RvVAR031_41290
Enzymes [BR:
avf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.118 3-dehydroshikimate dehydratase
RvVAR031_41290
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Motif
Pfam:
AP_endonuc_2
Glyoxalase_5
Glyoxalase_4
Glyoxalase
Motif
Other DBs
NCBI-ProteinID:
BCH56479
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Position
2:complement(903587..905557)
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AA seq
656 aa
AA seq
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MASPDKSDRTSTHASTHSSPGTVTMRTSIATVSISGEFPEKLAAIAKAGFSGVEIFENDF
LTYDASPRDVAKMVADHGLDITLFQPFRDFEGMPELHRARAFERAERKFEIMDELGTDLM
LICSNVSPISLGGIDRAAADFQELGERAAKHGVRVGYEALAWGRHVNDHRDAWEVVRRAN
HANVGLILDSFHTLSRKIDPNSIRSIPGDKIFIVQLADAPLFDMDLLYWSRHFRNMPCEG
DLPVVDFMRAVAATGYTGPLSLEIFNDQFRGGSPRAIAEDGHRSLVYLMDQVQRLEPDIR
LSAPAMPAPVETQGVEFVEFATSVEEKHDLAAFLATLGFSKTATHRNRDLDLYTQGDIRI
LINIDTTNNSFAGASYAIHGTSAYAFGMKVGHAEDALKRATALGATSFSEPRKPGEVPVP
AIQGVSNGVIYFLDDTPALSGIWKQEFKDLDADPALANTRLTRIDHLAQTTRYDEMLTCL
LFYGSIFATRRTPMVDVVDPGGLVRSQAIESKPDPRFRVTLNGADNRKTVAGKFLEEGFG
TSIQHIALATDDIFATAQALSACGFQALTISRNYYDDLEARFGLEPDFADALRSASILYD
RDDNGEYFQIYSRTFGEGFFFEIVERRGAYGGYGAMNAPFRIAAQRRQLRPDGVPR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccagacaaaagcgaccggacgagcacccatgccagcacccattcaagcccc
gggacagtaaccatgcggacatcgattgcaaccgtatcgatcagtggggaatttccggaa
aagctggcagccattgccaaggctggcttcagcggcgtcgagattttcgaaaacgacttc
ctgacctatgacgcctccccccgggatgtggcgaaaatggtcgccgaccacggtctcgat
atcaccctgttccagcccttccgcgatttcgaaggcatgccggaactgcaccgcgcccgc
gctttcgagcgggccgagcggaaattcgagatcatggacgagcttggcaccgacctgatg
ctgatctgctcaaatgtctctcccatctcgctgggcggcatcgaccgggccgccgccgat
ttccaggaactgggcgaacgcgcggcaaagcacggcgtccgcgtcggctacgaggcgctc
gcctggggtcgtcacgtcaacgaccacagggatgcctgggaagtggtgcgccgggcaaac
catgccaatgtcggcctgatcctcgacagttttcacaccctgtcgcgcaagatcgatccg
aactcgatccgttctattccgggcgacaagatcttcatcgtccagctcgccgatgcgccg
ctgttcgacatggatctgctctactggagccgccatttccgcaacatgccctgcgaaggc
gatttgccggtggtcgatttcatgcgcgctgtggccgccacaggctataccgggccgcta
tccctggagattttcaacgaccagttccggggaggctcaccgcgggccattgccgaggac
ggccaccgctcgctggtctatctcatggaccaggtccagcgcctcgaacccgatatccgg
ctcagtgccccggccatgccagcccctgtcgaaacccagggcgtcgaattcgtggaattt
gcgacctcggtcgaggaaaaacatgatctggcagcatttttagcgacgctcggcttttcg
aaaaccgcgacccatcgcaacagggatcttgacctctacacccagggcgacatccgcatt
ctcatcaatatcgatacgacaaacaacagttttgccggcgcatcctacgcaatccatgga
accagtgcctacgccttcggcatgaaggtggggcacgccgaagacgccttgaagcgcgcc
acggcgctgggggcaacgagcttctccgaaccgcgcaaaccgggcgaagtacccgtgcct
gccattcaaggggtgagcaatggcgtcatttatttcctcgatgacacgcctgccctatcc
ggcatctggaaacaggaattcaaagatctggacgccgatccggctctggccaacacccgc
ctgacccgcatcgaccatctcgcccagacaacccgctatgacgagatgctgacatgcctg
ctgttttacggctcgatcttcgccacgcggcgaacacccatggtcgatgtggtcgatccg
ggcggtctggtgcgcagccaagcgatcgaaagcaaaccagatcctcgtttcagggtgacg
ttgaacggcgccgataaccggaaaaccgtcgccggaaaatttcttgaggaaggcttcggc
accagcatccaacatatcgccctggcaaccgacgatatcttcgccaccgcgcaggcgctt
tcagcctgcggtttccaggcactgaccatctcgcgcaattattacgacgatttggaagcc
cgcttcggtctggagccggattttgccgatgcactgcgttcggccagcatcctttacgac
cgcgacgacaatggcgagtatttccagatctacagccgcaccttcggtgagggctttttc
ttcgaaatcgtcgaaaggcgcggcgcctatggtggttatggtgcgatgaacgccccgttc
cgtatcgcagcccagcgacggcagttgcgcccagatggcgttccgaggtaa
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