Agrobacterium vitis VAR03-1: RvVAR031_pl03440
Help
Entry
RvVAR031_pl03440 CDS
T08810
Name
(GenBank) putative cysteine synthase
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00260
Glycine, serine and threonine metabolism
avf00270
Cysteine and methionine metabolism
avf00670
One carbon pool by folate
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
avf01230
Biosynthesis of amino acids
Module
avf_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RvVAR031_pl03440
00270 Cysteine and methionine metabolism
RvVAR031_pl03440
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RvVAR031_pl03440
Enzymes [BR:
avf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
RvVAR031_pl03440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
BCH57013
LinkDB
All DBs
Position
pRvVAR031a:complement(386240..387307)
Genome browser
AA seq
355 aa
AA seq
DB search
MNILNRHSFDCIKAKASELIGDTPMLELAKTGTGSRLLLKLEQFNPTGSCKVRMARSMIL
AAEREGKLKPGGHIVEPTSGNTGTGLALVALERGYRFTAVVDHHASRDKLRAMKAMGADL
IFVEGNGEGPSTVQRRRMAEEIVAATGAFWPDQHYNPNNNLGYIGLAEELLRDVDADVDY
LVGAVGTGGTLCGTAKALRMLGSNVTSIGVEPTGSIIFGGPAGKYWQSGAGAPGGFTVGP
NVDHAFIDEGLTVDDVDAFSAARVIARRTGLLIGGTAGAAIHVAMKRLALVEPNSTMVVL
VCDAGEKYLDSIYDDDWLTERHLLDGAKHMGVHGLFDAYQESMRLVSAPAFSMGA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaatattctcaatcgtcactcttttgattgcatcaaggcgaaagcatcagaattgatt
ggtgatacgccaatgctcgaacttgcaaaaacgggcacgggaagccgacttttgctgaaa
ctggaacaattcaatccgacaggatcgtgcaaagtgcgcatggcgcgctcgatgatcctt
gccgccgaacgcgaaggcaagcttaagcccggcgggcatatcgtggagccaacatcgggt
aatactggcacagggctcgcgctcgtggcccttgaacgaggttatcggtttactgcggtg
gtggatcatcatgcgtcacgcgacaagctgcgcgccatgaaagcgatgggagccgatctg
atttttgttgaaggcaatggtgaaggacccagcacggtgcagcgccgacgcatggccgaa
gagattgtggccgcaaccggagccttctggcctgatcagcactataatcccaataataat
ttgggctacattgggcttgcggaagaactgctgcgggatgttgatgccgacgttgattac
cttgtgggtgccgttggcacgggtggaaccctgtgcggcacagccaaagcgcttcgtatg
cttggttcaaacgtaaccagcataggtgttgaacccacgggatcgattatttttggtggc
cccgccggaaaatactggcagtcgggagccggtgctccgggcggatttaccgttggtccg
aacgtagatcatgccttcattgatgaaggcctgacggtcgatgacgttgatgcctttagt
gctgcgcgcgtaattgcccgccgcacagggttgctgatcggtggcaccgcaggtgcggcc
attcatgttgccatgaaacgactggcgctcgttgagcccaatagcacaatggttgttctc
gtttgtgacgcgggcgaaaaataccttgatagtatttatgacgatgattggctgactgag
cgccatcttttggatggagccaagcacatgggcgtccatgggcttttcgatgcctatcaa
gagtccatgcgtttggtgagcgctccggcgttctcaatgggagcatag
DBGET
integrated database retrieval system
