Achromobacter veterisilvae: WHX56_11880
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Entry
WHX56_11880 CDS
T10582
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
avh Achromobacter veterisilvae
Pathway
avh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WHX56_11880 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avh03400
]
WHX56_11880 (nth)
Enzymes [BR:
avh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WHX56_11880 (nth)
DNA repair and recombination proteins [BR:
avh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WHX56_11880 (nth)
Prokaryotic type
WHX56_11880 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WXR76161
LinkDB
All DBs
Position
complement(2574583..2575218)
Genome browser
AA seq
211 aa
AA seq
DB search
MNAAKRREIFARLQAANPHPTTELEYDTPFQLLIAVLLSAQATDKSVNIATRKFFPAHGT
PQGLLALGEEGLADYIKTIGLYRTKAKNTIATCRILIEQHGGEVPQTREALEALPGVGRK
TANVVLNTAFGQPTMAVDTHIFRVSNRTGIAPGKNVLEVERKLEKFVPAEYMQDAHHWLI
LLGRYVCVARKPKCPQCGISDLCEFKQKTPA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccaaacgccgagaaatcttcgcccgcctgcaagcggccaatccgcacccc
acgaccgaactggaatacgacacgccgttccagttgctgatcgccgtgctgctgtcggcg
caggccaccgacaaatcggtcaacatcgccacgcgcaagttcttccccgcgcacggcacg
ccgcaaggcctgctggcgctgggagaggaagggctggcggactacatcaagaccatcggg
ctctaccgcaccaaggcgaagaacaccatcgccacgtgcaggatcctgatcgaacagcac
ggcggcgaagtgccgcagacccgcgaggcgctggaagccctgcccggcgtgggccgcaag
accgccaacgtggtgctcaacaccgccttcggccaacccacgatggccgtggacacgcac
atcttccgcgtgtccaaccgcaccggcatcgcccccggcaagaacgtgctggaagtcgaa
cggaagctcgagaaattcgtgcccgccgaatacatgcaggacgcgcaccactggctgatc
ctgctgggccgctacgtctgcgtggcgcgcaagcccaaatgcccccagtgcggcatttcc
gatctctgcgaattcaagcagaaaacgcccgcctga
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