Allorhizobium ampelinum: Avi_3842
Help
Entry
Avi_3842 CDS
T00851
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Avi_3842 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_3842 (nth)
Enzymes [BR:
avi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Avi_3842 (nth)
DNA repair and recombination proteins [BR:
avi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Avi_3842 (nth)
Prokaryotic type
Avi_3842 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACM37767
UniProt:
B9JSS4
LinkDB
All DBs
Position
1:complement(3192634..3193398)
Genome browser
AA seq
254 aa
AA seq
DB search
MKSSTQTLKKSISSPSQPKPAGRKVAVRSAYSKAELEEIFRRFSVQRPEPKGELEHVNPF
TLVVAVALSAQATDAGVNKATRALFAVADTPEKMLALGEEKVRDYIKTIGLFRNKAKNVI
ALSQKLIDDFGSEVPKTREELVTLPGVGRKTANVVMSMAFGIPTMAVDTHILRIGNRIRL
APGKTPDEIEEILMRIIPKHYLFHAHHWLILHGRYCCKARKPECERCVIADLCKSPEKTC
DVPAPLVELPPQIL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccagcacgcaaactttgaaaaagtcaatttcttccccctctcaacccaagcca
gcgggacgaaaagtcgcggttcgcagcgcctattccaaggccgagctggaggaaatcttc
cggcggttttccgtgcagcgcccggaaccgaagggcgagctggagcatgtcaacccgttt
acccttgtcgtcgccgtggcgctctcggcgcaggcaaccgatgcgggggtcaacaaggcg
acccgcgccctgtttgccgtggccgatacgccggaaaaaatgctggcgctgggcgaagag
aaggtgcgcgactatatcaaaaccatcggactttttcgcaacaaggcgaagaatgtcatc
gccctcagtcaaaagctgatcgatgatttcggcagcgaggtgccaaaaacccgcgaagaa
ttggtgacgctgcccggcgtcggccgcaagactgccaatgtggtgatgtccatggctttt
ggcattccgaccatggccgtcgatacgcatattttacggatcggcaaccgcatccggctg
gcacccggcaagacaccggatgagatcgaggagatcctgatgcggatcatccccaagcac
tatctcttccatgcccatcactggctgatcctgcatgggcgctactgttgcaaggcccgc
aagccggaatgcgagcgctgcgtgattgctgacctgtgcaaatcgccggaaaagacctgc
gatgttcccgcgcccctggtggaactaccgccgcagatcctttga
DBGET
integrated database retrieval system
