Apaloderma vittatum (bar-tailed trogon): 104268866
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Entry
104268866 CDS
T08559
Name
(RefSeq) actin, cytoplasmic 1 isoform X1
KO
K05692
actin beta/gamma 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03082
ATP-dependent chromatin remodeling
avit04145
Phagosome
avit04210
Apoptosis
avit04510
Focal adhesion
avit04520
Adherens junction
avit04530
Tight junction
avit04810
Regulation of actin cytoskeleton
avit04814
Motor proteins
avit04820
Cytoskeleton in muscle cells
avit05100
Bacterial invasion of epithelial cells
avit05132
Salmonella infection
avit05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104268866
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104268866
09143 Cell growth and death
04210 Apoptosis
104268866
09144 Cellular community - eukaryotes
04510 Focal adhesion
104268866
04520 Adherens junction
104268866
04530 Tight junction
104268866
09142 Cell motility
04814 Motor proteins
104268866
04820 Cytoskeleton in muscle cells
104268866
04810 Regulation of actin cytoskeleton
104268866
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104268866
09171 Infectious disease: bacterial
05132 Salmonella infection
104268866
05100 Bacterial invasion of epithelial cells
104268866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104268866
03019 Messenger RNA biogenesis [BR:
avit03019
]
104268866
03036 Chromosome and associated proteins [BR:
avit03036
]
104268866
03029 Mitochondrial biogenesis [BR:
avit03029
]
104268866
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
avit04812
]
104268866
04147 Exosome [BR:
avit04147
]
104268866
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104268866
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
104268866
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
104268866
NuA4 complex
104268866
Chromatin remodeling factors
BAF complex
104268866
PBAF complex
104268866
GBAF(ncBAF) complex
104268866
SWR1 complex
104268866
Mitochondrial biogenesis [BR:
avit03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
104268866
Cytoskeleton proteins [BR:
avit04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
104268866
Exosome [BR:
avit04147
]
Exosomal proteins
Proteins found in most exosomes
104268866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
104268866
NCBI-ProteinID:
XP_009869802
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatattgccgcactcgttgttgacaatggttccggtatgtgcaaggccggt
ttcgccggggacgatgctccccgtgctgtctttccatccatcgtgggtcgccccagacat
cagggtgtgatggttggtatgggccagaaagacagctatgttggtgatgaagcccagagc
aaaagaggtatcctgaccctgaagtaccccatcgagcacggcattgtcaccaactgggat
gacatggagaagatctggcaccacactttctacaacgagctgagagtagctcctgaggag
caccctgtgctgctcacagaggctcccctgaaccccaaagccaacagagagaagatgaca
cagatcatgttcgagaccttcaacaccccagccatgtatgtagccatccaggctgtgttg
tccctgtatgcctctggtcgtaccactggtattgtgatggactctggtgatggtgttacc
cacactgtgcccatctacgaaggttatgccctcccccatgccatcctccgtctggatctg
gctggccgtgacctgacggactacctcatgaagatcctgacagagagaggctacagcttc
accaccacagccgagagagaaattgtgcgtgacatcaaggagaagctgtgctacgtcgcc
ctggattttgagcaggagatggccacagctgcctctagctcttctctggagaagagctat
gaactccctgatggccaggtcatcaccattggcaacgagaggttcaggtgccctgaggcc
ctcttccagccatctttcttgggtatggagtcctgtggtatccatgaaactaccttcaac
tccattatgaagtgcgatgtggatatccgtaaggacctgtatgccaacacagtgctgtct
ggtggtaccacgatgtaccctggcattgctgacaggatgcagaaggagatcacagccctg
gcacccagcacaatgaaaatcaagatcattgccccacctgagcgcaagtactctgtctgg
atcggaggctccatcctggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgaatccggaccctccattgtccaccgcaaatgcttctaa
DBGET
integrated database retrieval system