Apaloderma vittatum (bar-tailed trogon): 104270416
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Entry
104270416 CDS
T08559
Symbol
RNF123
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104270416 (RNF123)
Enzymes [BR:
avit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104270416 (RNF123)
Ubiquitin system [BR:
avit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104270416 (RNF123)
Multi subunit type E3
KPC complex
104270416 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
DUF7050
Motif
Other DBs
NCBI-GeneID:
104270416
NCBI-ProteinID:
XP_009863081
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MTSRGAGTAFSRKNYRLSTEPEKSKVTGIVNSRLLNDYLHRVFTNADGNQPAAAYRKHLT
FQNLQEHLDRLLAEENGSEDSRDQAAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNITRGAGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYRPLQDPPVADLVKARKLLGYLKNVIHIGIDVTEGKLVE
KDTSMWQLQGEPTVLITLAHIFNYLSPLMCKVYLVEDVLMTFLLSILERGGAVEAHPLIQ
QLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAEE
RLRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENA
SNRGNLTVLCPPEYMVCFLHRLIAALRFFWDGHKAKTPDALSSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLAAKANVLIDPAELQAVTMDDLDEDEESATSTAQSQRPST
ALAIGGALARPGWLSSPTLGRANRFLSTAAVSLMNPRRPLGTLEKIKVRTLSVEQRTEED
IEGSHGNEGLLLGRPPEELDQPITENSLLEVLDGIVMMYNLSVHQQLGKMVGVSDDVNEY
AMALKDTEEKISRCPKRRRDIHEELVKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDIY
WLLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETLMR
LAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPYE
QRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSTLLQRHMADLL
RSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSV
SLLRVLEMTVTLAPEIFLDWTRPSSELLLRRLAQLLNQVLXVTAERNLFDRVVNLRLPGL
ESVDHYPILVAVTGILVRLLVDTDVQG
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagaggtgctgggactgcgttctcgaggaagaactacaggctgagcactgag
ccagagaagtccaaggtcacagggattgtgaacagcaggctgctgaatgattatctgcac
cgggtatttaccaatgctgatgggaaccagcctgcagccgcttacagaaagcacctgacg
ttccagaacctgcaggagcaccttgaccgattgctagcagaggagaatggttcagaagac
agtcgagatcaggcagcagaaggccggcttggtccctccactgtggtgttggaccacacg
agcggttttgaggggctcctgctggttgacgacgacttacttggagtgattggccacagt
aactttggatccatcagagccacgacatgtgtgtacaaggggaagtggatttacgaggtg
cttatctcctcccagggactcatgcagattggctggtgtactctcaactgcagatttaat
caggaggaaggagttggagatacgccagattcgtatgcgtatgatggaaacagggtgcgc
aagtggaatgtgactactaccaactacggcaaatcttgggcagcaggagacatcgtcagc
tgtctgatagaccttgatgagggcaccattgctttctgcttgaatggtatatctctggga
actgcttttgacaacatcacgaggggtgctggaatggcttacttccctgccatcagcctc
tcgttcaaagagtccgttgcttttaacttcggaagccgtccactccgttatccagtggaa
ggttaccgccccttgcaagatcctccagttgcagacctagtgaaggctcgcaagctgtta
ggctacttgaagaatgtgatccatatcggaatagatgtgacggaggggaagctggtggag
aaggacacatccatgtggcagctgcagggagaaccaacagtgttgattacgttagcccac
atcttcaattatctctcacctcttatgtgcaaggtttacctggtggaagatgtgcttatg
accttcctgttgagcatccttgaacgaggaggagcagtggaggcccatccccttattcag
cagctgctggatctcatgtggcttcttatggaggagtatgaagtgcatgagtgcctcaag
cagttactgatgtccctgctgcgggcttacaggttctctcccatcatcccagacctggga
ttacaaattcactacctccggctcaccattgcagtcctgaagcatgagaaatccaggaaa
tacctactcagcaatgttctcttcgatgtgctccgttcagttgtgttcttctacatcaag
agcccgttgcgtgtggaggaggctggtttgcaggagctcattcccaccacgtggtggcca
aaccgcttcaccaaggagggcaaggagagtaaggaggtgaaggaggaaagtgctgaggag
agactgaggcggcgggcgtatgaaagaggctgccagcggctcaagaaacgcattgaagtg
gtggaaggtctccaggttcagattctgaagctgctgctgaacaacaaggacagaggaggg
ggggaagcatccagatatatcttccttaacaaattccgcaagtttcttcaggaaaacgct
agcaacagagggaacttgactgtgttgtgcccgccagagtacatggtatgcttcctgcac
cggcttatcgctgccctgcgcttcttctgggatggccacaaggcaaagacccccgatgca
ctgagcagtgaagaggcgtatgtccctcctcagctcttctataatgggaaggtggattat
tttgaccttcagcgacttggaggtctcctgtctcatcttaagaagactctaaaagatgac
ctggctgcaaaagccaatgtcttgattgaccctgcggagctgcaggcagtgactatggat
gatcttgatgaagatgaggaatcggcaacatcaacagcacagtctcagcgtccctccact
gccctggccattggtggagctcttgccagacctggctggctaagctcccccaccctgggc
cgtgccaatcgcttcctcagcacggcagccgtcagcctgatgaatccacgacggcctctt
ggcaccctggagaagattaaagtgcgcacgctaagtgtggagcagcggacagaggaggac
attgaaggcagccatggaaatgagggtctcttactgggtagacccccagaggagctggac
cagcccatcacagagaactccctcctggaagtcctggatgggatagtgatgatgtacaac
ctcagcgtgcaccagcagcttgggaagatggttggcgtgtcagatgatgtgaatgaatat
gctatggcattgaaagacacagaggaaaaaatcagccgttgcccaaagagaaggagagac
atccatgaggaactggtgaagagccaaaaggtcttctctgagaagctcaatcacctaagc
cgacgcctcgcttggataaatgtcaccatttattcaaaggagaagatgcaggatatatat
tggctgctgcgagtgtgcatccgcaccattgagcatggtgacaggacaggctcacttttt
gctttcatgccagagttctacctcagcgtggctatgaacagctacagcgcactcaaaaac
tacttcagccctgtaaacagcatggaggaacttccaggctatgaagagaccctgatgcgc
ctcgctgccatcctggccaagcattttgctgactcgaggattgtaggcacagacatccgg
gactccctgatgcaggcgttggccagctacgtttgctacccccactcgctgcgtgctgta
gagaggatcccagaagagcagcgcatctccatgatgaagaacctcctggctccttacgag
cagcgaccctgggcccagaccaactggatccttgtcaggctgtggcggggctgtggattc
ggatacagatacacacggctcccacacctactgaagaccaagcctgaggatgccagcctc
cccagcctgcagaagccatgtccctctaccttgctgcagcggcacatggcagacctgctc
cgcagtgaccgcgacctggcccccagcttcctcaacagcgtcctcaaccagctgaactgg
gctttctccgagttcattggcatgatccaggagatccagcaggcagcagagcgcttggag
aggaactttgttgacagccggcagctgaaagtgtgtgccacctgctttgacctgtcggtg
agcttgctcagggtgctggaaatgactgtcacgctggcaccagagatctttctggactgg
actcgcccgtcgtctgagctgctgcttcggagacttgcccagctcttgaaccaggtgcta
nntgtgacagctgaaaggaacttgtttgacagagtggtcaacctccgtctgccggggctg
gagagcgtggaccattacccaatcctcgtggcagtgacggggatactcgtccggctgctt
gtggacactgatgttcaggggtga
DBGET
integrated database retrieval system
