Apaloderma vittatum (bar-tailed trogon): 104271225 Help Entry 104271225         CDS       T08559                                  Symbol TRAF2 Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism avit  Apaloderma vittatum (bar-tailed trogon) Pathway avit04010   MAPK signaling pathway avit04137   Mitophagy - animal avit04141   Protein processing in endoplasmic reticulum avit04210   Apoptosis avit04217   Necroptosis avit04621   NOD-like receptor signaling pathway avit04622   RIG-I-like receptor signaling pathway avit04920   Adipocytokine signaling pathway avit05132   Salmonella infection avit05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:avit00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     104271225 (TRAF2)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     104271225 (TRAF2)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     104271225 (TRAF2)   09143 Cell growth and death    04210 Apoptosis     104271225 (TRAF2)    04217 Necroptosis     104271225 (TRAF2)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     104271225 (TRAF2)    04622 RIG-I-like receptor signaling pathway     104271225 (TRAF2)   09152 Endocrine system    04920 Adipocytokine signaling pathway     104271225 (TRAF2)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     104271225 (TRAF2)   09171 Infectious disease: bacterial    05132 Salmonella infection     104271225 (TRAF2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:avit03019]     104271225 (TRAF2)    04121 Ubiquitin system [BR:avit04121]     104271225 (TRAF2) Enzymes [BR:avit01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      104271225 (TRAF2) Messenger RNA biogenesis [BR:avit03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      104271225 (TRAF2) Ubiquitin system [BR:avit04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     104271225 (TRAF2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 zf-C3HC4_4 zf_C2HC_14 zf-RING_6 zf-TRAF_2 zf-RING_10 zf-RING_5 Sina_ZnF zf-C3HC4_5 MATH zf-RING_UBOX Motif Other DBs NCBI-GeneID:  104271225 NCBI-ProteinID:  XP_009864132 LinkDB All DBs Position Unknown AA seq 472 aa AA seqDB search MAAANSTPPGSLDLNQPGFAKEILGTKLEVKYLCSDCRNILRRPYQAQCGHRYCSYCLKK IISAGPQKCASCIQEGIYEEGISILETSSAFPDNAARREVESLPAVCINSGCTWKGTIKE YEAHDEVCPEFPLTCEGCGKKIPREKFRDHVKTCGRSKVPCRFEVVGCTEVVENEKLLEH ESKCLAEHLYMLLSFVLSLKAGSGDLKPLPALSSSQKSSPLLAANSLCSESELSRSLELL GRCEALERKTVTFENIVCVLNRGVESVSLTAEAYSRQHRLDQEKIETLSNKVRQLERSIG LKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYK MCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRP DVTSSSFQRPITEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVDLTGL NT seq 1419 nt NT seq  +upstreamnt  +downstreamnt atggcagcagcaaactctactccgcctggctctttggatctaaaccagcccggatttgcg aaggagatcctgggaactaaactggaggtcaaatacctctgctctgactgcaggaatata ctgaggaggccataccaagctcagtgtggacatcgctactgctcctattgtctaaagaag atcataagtgctggacctcagaagtgtgccagctgtattcaggaaggaatatatgaagaa gggatttctattctggaaacgagctcggctttcccggacaacgcagctcggcgggaggtg gagagcctgcctgccgtctgcatcaacagcggctgcacctggaaggggactattaaagag tacgaggctcacgacgaagtctgccctgaatttccgctgacgtgcgaaggctgtgggaag aagattccgagggagaagtttcgggaccacgtgaagacttgcggcagatctaaagtgccg tgcagatttgaggtggtgggatgcactgaggtggtggagaacgaaaagctgctggaacac gaaagcaagtgtttggccgagcatctctacatgctgctgagctttgtgctcagcctcaaa gctggctctggagacctcaagccccttcctgccctttcctcctcgcagaagagctccccg ctgctggcagccaactcgctgtgctccgagtcggagctgtccaggtccctggagctcctg gggagatgtgaggccctcgagaggaaaacggtgacctttgagaacattgtctgcgtgctc aatcggggggtggaaagcgtgtctctcacagccgaagcctacagtcggcagcaccggctc gaccaggagaaaatcgaaacgctgagtaacaaggtccggcagctggagaggagcatcggg ctcaaagacctggccatggctgagatggaggaaaagatccgcaacatggaagcttccacc tatgacggggtgttcatctggaagataacggagtttgcccgcaagcgtcaggaggcaatc acgggccgctctcctgccatcttctctccagctttctacacgagcaagtacggctacaag atgtgtctgcgcatttacctgaacggggacggcaccgggcgtgggacccacctgtccttg ttctttgtggtgatgaaaggccccaacgacgcgcttctgcggtggcccttcaaccagaag gtaaccctgatgcttctggatcagaacaaccgggagcacatcatcgatgccttccgaccc gacgtgacatcctcctccttccagcgacccatcacggagatgaacatcgccagcgggtgc ccgctcttctgccccgtctccgtgatggaagccaagaactcctacgtgcgtgatgacgcc atctttattaaagccatcgtcgatctcacgggcctctaa

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