Apaloderma vittatum (bar-tailed trogon): 104271840
Help
Entry
104271840 CDS
T08559
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
avit04812
]
104271840 (PKP1)
Cytoskeleton proteins [BR:
avit04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
104271840 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
HEAT
HEAT_EZ
HEAT_2
V-ATPase_H_C
ARMC9_ARM
Arm_2
Mo25
Motif
Other DBs
NCBI-GeneID:
104271840
NCBI-ProteinID:
XP_009864945
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSS
SVGHSNRGSMYDGLADGYGYGTSRGSYYAKTQTGNSSWGYPLYNGTLKRDVENRRYSSYS
QMEGWGSKHYSKAVCSPARAGSDYCFVQNIKSSRSEPDLYCEPPRGTLRKNQMGGRAEHK
ATLNRQSIYSSCSTQQGTTRTSKKMPTRALSCPSSNKPDVVYAQPMMSCKQDVVYGQAQS
SSKICGDEIDGGTMTIQKAIQLLCSSDDKYQAMGAYYLQHTCFQDESAKQEVYRLGGIAK
LVELLRSTNQNVQRAAAGALRNLVFKNPTNKIETRRQNGIRECVSLLRRTGNTEIQKQLT
GLLWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDGSCNRTREIIDPEVFFNATGCLR
NLSSADMGRQTMRNYPGLIDSVMTYTQNCVASNRPDDKSVENCICILHNLSYRLDAEVPN
KYAQLNHMARSVYMDKTLTGCFNSRSGKMENDEYGVPLPEEDFKPKGPTWLYHSDAIRTY
LSLMDQSKKDATLEACAGALQNLTASRGLMSNAMSQLIGLKEKGLPRIARLLQSNSSEVV
RSGASLLSNMSRHPVLHKTMAHQVLPDVSRLLSYPSGNTNSYGEIMTSACYTLRNLIMSN
PHLGKSYLSSNMLNNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNRMG
SLAGTTFRTLSSRF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactctccgctgaaaacagcgttggcgtatgagtgcttccaagaccaggccagc
tccactctggctctgccctcggaccacaagctgaaaactaagggcacgggaaaacaacgg
gttcaagagcaagtgatgatgacggtgaagcggcagaagcaaaagtcgtctgtgtcgtcc
agcgtgggccactccaaccgaggttccatgtacgatggtttagctgatggttatggctat
gggacctcccggggcagctattacgccaaaacccagacaggaaacagcagctgggggtat
ccgctgtacaacgggaccctgaagcgggacgtggagaaccggcgctacagctcgtacagc
cagatggagggctggggcagcaagcactacagcaaggctgtctgcagcccggccagggct
ggcagcgactactgcttcgtgcagaacatcaagagcagccgcagcgagcccgacctctac
tgcgaaccgccccggggcacgctgaggaagaatcagatggggggccgggcagagcacaag
gcgaccttgaaccgccaaagcatctacagcagctgtagcacccagcaaggaactaccagg
acaagtaaaaaaatgccaacgcgggccctctcctgcccctcaagcaacaagcccgacgtg
gtctatgcccagcccatgatgagctgcaagcaggatgtggtttacggacaggctcagtcc
agctccaaaatatgtggtgatgagatagacggtggtacaatgaccatccagaaagccata
caactgctgtgctcctctgatgacaaataccaggccatgggtgcttactacctccagcac
acctgcttccaggatgaatctgccaagcaagaggtctatcggctgggggggatcgccaag
ctcgtcgagttgctccgcagcacaaaccagaacgtacagcgggcggcagctggagccctc
cgaaatctggtcttcaagaatccaaccaacaagatagaaaccaggcggcagaatgggata
agggaatgcgtgagcctcttgcggaggacagggaacaccgaaattcagaaacaactgaca
ggactgctctggaacctctcctccaccgatgaactaaaagaagagttgatacaggaggcc
ctccccgtcttgacagactgtgttatcatccctttctctggctggtctgatggcagctgc
aacaggacacgagaaattattgacccagaagtattcttcaatgctacagggtgtttgaga
aacttgagttctgcagacatgggacgccagaccatgaggaattaccctggcttgatcgat
tctgtcatgacttacacccagaactgcgtggcttctaaccgacctgatgataagtctgtg
gagaattgcatctgcatcctgcacaacctctcctaccgcctggatgctgaagttcccaac
aaatacgcccagctcaaccacatggcccggagcgtttacatggacaaaactctcacgggc
tgtttcaacagcaggagtggtaaaatggagaacgatgagtacggtgtccccctccccgag
gaggattttaaacccaaaggacccacctggctctaccactccgatgccatccgcacctac
ctgtccctgatggatcagagcaagaaggatgccaccctggaagcttgtgctggagctctg
cagaacctcactgcgagccgagggctgatgtccaacgcaatgagccaattgattggtttg
aaggaaaaagggttacctcgcatagcacggctcctccagtccaacagctctgaagtcgtg
cggtctggggcttctttgctgagcaacatgtcccgacatcctgttctccacaaaaccatg
gctcaccaggtgctcccagatgtatcacgtctcctgtcatacccgtctggaaataccaac
agctatggcgagatcatgacatcagcttgttacactctgaggaacctcatcatgtccaac
ccacacctgggaaagtcttacttgtcaagcaacatgctaaataatgtagtaagcctgtgc
cgaaatggctcctgtccgaaagcggccgaagctgctcgcctcctcctgacagatctttgg
tccaacagggagctccagagtgtgctcaagcagcaaggatttgataagaataggatggga
tctttagctggaacgaccttcaggaccctctcctccagattttag
DBGET
integrated database retrieval system
