Apaloderma vittatum (bar-tailed trogon): 104272938
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Entry
104272938 CDS
T08559
Name
(RefSeq) telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104272938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104272938
03032 DNA replication proteins [BR:
avit03032
]
104272938
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104272938
mRNA cycle factors
Common to processing body (P body) and stress granule
104272938
DNA replication proteins [BR:
avit03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
104272938
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PKI
Motif
Other DBs
NCBI-GeneID:
104272938
NCBI-ProteinID:
XP_009866357
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MQEAKEPRHRKDSRRPDLEIYKPGLSRLRSKLVPPKHETSEKERSRAEEGKEESASDKGS
LGGGAPVTEDFSKGDGPKQNGPSQENEETEAKGGVQSQENLARQPAPDEWGPKSARRTKK
PDQQIYQPGKRLHSAAKEPSLQAATEELTGKMEQLKVERDEETEKGAGKDNNRKTKSSKE
DREGSQAREGVKTSRGEKGRRMERSDRVRRTSDEVLQGKLGSTKRYSRSDKRRSRYRTCS
TSSAGSNNSVDGALLVDGVERRQERARERLRPRKQLSASSTDSLDDDRIEEADAYVSSRL
SDKKKRSEQSRASRSEGEWSSNGREVKGPFRVTFDSKTMSRDISLADTDKKKPLKASVSC
NDSEALEVRNQSREPQGRGRGILFLPANTDLSASTVGCPEPSHPGPRLLLGGAGTKGPRS
RGRGGTARRLWDPNNPDQKPALKSQTAQLLFLDTDDEVSPTSWGEARQAQTSYYQELSKL
LREAGNQEQQLSNLLSRDRISPEGLEKMTQLRVEMLQLYERCILMDIEFSDTQNVDQLLW
KNAFYQVIEKFRQLLKDPQGENAQEIRNKLLQLLDEGTSFFDGLLQKLQVSYQFKLEDYM
DGMAIRSKPLRKMVKYALISAQRSMICQGDICRYREQANDTANYGKARSWYLKAQQIAPK
NGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEQRK
HQVLDLSPSRRGKGKKSTLRQVGDDATRLEIWIHPSHPRSSQGHESGRDSEQDNSLGNLS
PSDLNKRFILSFLHAHGKLFTRIGSQTRPVVTEEVLREFQVLLQHSPPPIGSTRMLQLVA
INMFAVYNSQPK
NT seq
2557 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagcgaaggagccgaggcatcgcaaagacagcaggcgcccagacctggagatt
tacaagcctggcctctcccgactgaggagcaaacttgtgccaccaaagcacgagacttcg
gagaaggagaggagcagagctgaggagggcaaggaggagagtgccagtgacaagggctct
ttgggaggaggcgctccagtcacggaggatttcagcaaaggcgatggccccaagcagaat
ggtccttcacaggaaaatgaagagacagaggctaaaggtggtgtccagagccaggagaac
ttggccagacagcctgctccagatgagtggggtcccaagagcgccaggagaaccaagaag
ccagaccagcagatctaccagcctgggaagcgcctgcattcagctgctaaagagccatcc
ctgcaggcagctactgaggaacttaccggtaagatggagcagctgaaagttgagagagat
gaagagactgagaaaggtgctggaaaagacaataacaggaaaacgaaatcaagcaaggag
gatcgagaggggagccaggcaagggaaggagtgaaaacctcaaggggcgaaaaaggaaga
cgaatggagcgaagcgacagggtgaggagaacaagcgacgaggtgctgcaggggaagctg
ggctccaccaagcgctactcccgctcggacaagcgacggagccggtaccgcacctgcagc
acaagctcagccggaagcaacaacagcgtggacggagccctgcttgtggatggggtggag
aggcggcaggagcgagccagggaaaggctgcgtcctagaaagcaactctctgcatcctcc
actgactccctggacgatgacaggatcgaagaggcggacgcatacgtctccagcaggctg
tcggacaagaagaagcgttcagagcaaagccgagcttctaggagtgagggcgaatggagc
agcaacggcagggaggtcaagggaccctttcgagtcacttttgacagcaagactatgagc
agggacatcagtctggcagatacagataaaaaaaagcccctaaaggcgtctgttagttgc
aatgactcagaagctttggaagtgaggaaccagagcagagagccccaagggaggggccgt
gggattctcttcctgcctgccaacacagacctctctgccagcaccgtgggctgccccgaa
cccagtcaccctgggcccaggctcctgctcggtggggctgggactaaaggcccccgaagc
cggggccgaggcggcacggctcgcaggctgtgggacccaaataacccggaccaaaaaccc
gccctgaagagccagaccgctcagcttctcttcctagacacggacgatgaagtgagccca
acctcctggggcgaagctcgccaggcccagacatcctactatcaggagctcagcaaactc
ctccgcgaggctgggaaccaggagcagcagctcagcaatctgctttccagagaccgcatc
agcccggaggggctggagaagatgacccagctgagggtggagatgctgcagctgtatgaa
cggtgcatcctgatggatatcgagttctctgatacccagaacgtggatcagctgctctgg
aagaacgcgttttaccaggtgattgagaagttccggcagctcctcaaggaccctcagggg
gaaaatgcacaagaaattcggaacaaacttctccagcttctagatgagggcacttctttt
tttgatggcctactccaaaagctgcaggtgtcgtaccagttcaagctagaggactacatg
gacgggatggccatccgcagtaaacctctgaggaaaatggtgaagtacgcgctgatcagt
gctcagagatctatgatctgtcaaggggacatttgccgatacagagaacaagcgaatgac
accgccaactacggaaaggcacgcagctggtacctgaaggctcagcaaattgctcccaaa
aacggccgcccgtacaaccagctggcgcttctggccatctacacgaggagaaagctggac
gctgtctactactacatgcgcagcctggctgcgagcaaccccatcctcacagccaaggaa
agcctcatgagtctgtttgaagagacaaaacgcaaggccgagcagatggagcagaggaaa
catcaggtgctggatctgagccccagccgccgggggaagggcaagaagtccacgttgcga
caagttggagatgatgccacacggctggagatctggatccatccctcccacccccgctcc
tcccagggccacgagtccggcagggattcggagcaggacaacagtcttgggaacctcagc
cccagcgacctgaacaaaaggttcatcctcagttttctccatgcccatgggaagctgttt
accaggattggcagccagacgaggccagttgttaccgaggaggtcctgagggagttccag
gtgctgctgcagcacagcccccctcccatcggcagcacccgcatgctccagctcgtggca
atcaacatgtttgcagtgtacaactcccagcccaaag
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