KEGG   Apaloderma vittatum (bar-tailed trogon): 104276794
Entry
104276794         CDS       T08559                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04010  MAPK signaling pathway
avit04020  Calcium signaling pathway
avit04510  Focal adhesion
avit04540  Gap junction
avit04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:avit00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    104276794 (PDGFRB)
   04020 Calcium signaling pathway
    104276794 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104276794 (PDGFRB)
   04540 Gap junction
    104276794 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    104276794 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:avit01001]
    104276794 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:avit04090]
    104276794 (PDGFRB)
Enzymes [BR:avit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     104276794 (PDGFRB)
Protein kinases [BR:avit01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   104276794 (PDGFRB)
CD molecules [BR:avit04090]
 Proteins
  104276794 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 I-set ig Ig_2 V-set C2-set_2 VEGFR-1-like_Ig-like VEGFR1-3_N_Ig-like
Other DBs
NCBI-GeneID: 104276794
NCBI-ProteinID: XP_009871530
LinkDB
Position
Unknown
AA seq 1086 aa
MLRRSPKASLCLLILTGLLEVPSGGNGLHIEPGDTELVLSLHSTFSLLCYGEGALVWERE
GQPLAASLEHRDGVFISNLTLSNVTGRHTGEYACTYSPDQAPEPVERKALYIYIPDPSLV
FLPTITSEEVFIFITGYTEAVIPCRVTNPQMQVTLYEKKVEIPIPAAYDPQQGFKGFFED
KTYFCRAIVGDQEVDSDTFYVYRIQVSSVNVSISAVQTIVRQGENITLMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYICNVSEGYHEKTDRKD
ITVHVIERGFVRFHTRLPSTVYAEVHKSHTIQVEVEAYPQPSIVWLKNNKTLTSSEFTIT
SRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVNLKENSSA
SSGEQTITCSAEGMPQPEISWSTCTDIKWCSTKGQPTRLLGNESAEIGLQTNATYHAELQ
VYRVNSTLQLHRVDEPLLLRCTVKNFLGTNFQDITLVPHTLPFKVVIISVILALLVLTVI
SLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGRTLG
SGAFGRVVEATAHGLSHSQSSMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNL
LGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAELYGNTAKEDHVQSH
LSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPERTD
RVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGL
ARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPEL
PMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVDCYR
KRYQQVDEEFMKSDHPAVVRTRPVIPGLNNARLAASSILYTAVHQNGGENDYIIPLPDPK
PEAICDLPQEASISRASSMLNEANTSSTISCDSPLGLRQDEEQESDTQPSCQEPATGHQE
VEESFL
NT seq 3261 nt   +upstreamnt  +downstreamnt
atgctgcgacgctctccaaaggcatctctttgtctcctcatcctcaccggtctgctggag
gtcccatctgggggcaacgggctgcacattgaacctggagacaccgagcttgtcctcagc
ctccacagcacgttctccctcctgtgctatggggagggcgcgctggtctgggaacgggag
ggtcagcccctcgccgcctcgctggagcacagggatggtgtcttcatcagcaatctcacc
ctcagcaacgtgacgggccgtcacactggggagtacgcatgcacctacagccctgaccag
gctccagagccagtggagaggaaagccctgtacatctacattccagatccctccctagta
ttcctccccacaatcacctcagaagaggtcttcatcttcatcacgggctacacagaagct
gtcatcccatgtcgcgtgaccaacccacagatgcaggtgaccctctatgagaaaaaggtg
gagatccccatcccagcagcttatgacccacaacagggattcaaaggcttctttgaggat
aagacctatttctgccgagcaattgtgggtgaccaggaggtggattcagacaccttctac
gtctacaggatccaggtctcatctgtgaatgtgtccatcagcgcggtgcagaccatagtg
cgtcagggagaaaacattaccctgatgtgcacagtgagcggcaatgagctggtcaacttc
aactgggattatccccgcaagcaggcagggaaggctgtggagccagtgaccgacttcctg
cccggatccacccatgaaatccgctccatcctcatcatccagaacgcggagctggaggac
agcgggacctacatctgcaatgtctccgagggctaccatgagaaaacggaccggaaagac
atcacagtccatgtgatcgagcgtggctttgtgcgcttccacacgcgcctgcccagcaca
gtgtacgcagaggtccacaaaagccacaccatccaggtggaggtggaggcctacccacaa
cccagcattgtgtggctgaagaacaacaagacgttgaccagcagcgagttcaccatcacc
agcaggaacctgtcagaaaccaggtaccagacagctctggtgctggtgcgggtaaagcag
gaagaaggaggattttacaccatccgggcttccaatgaggatgatgagcaggagctgtcc
ttccatctgcagataaatgtgccagccaaagtggtgaatctcaaggagaacagcagtgcc
agcagtggggagcagaccataacatgctctgctgaaggcatgccccagccagagatcagc
tggtctacctgcactgacatcaaatggtgcagcaccaagggacagcccacccggctcctg
gggaatgagtcggcagagatcgggctgcagaccaacgccacgtaccacgcggagctgcag
gtgtaccgggtgaacagcaccctgcagctgcacagagtggacgagcccttgctcctgaga
tgcaccgtgaaaaacttcctgggcaccaacttccaggacatcactctggtcccacacacc
ttgccattcaaggtggtcatcatctctgtcatcctggccttgctggtcctcaccgttatc
tccctgatcatcctgatcgtcctgtggcagaagaaacctcgttatgaaatccgctggaag
gtgatcgagtcagtcagctccgatgggcacgagtacatctacgtggatcccatgcagctc
ccatacgactccagctgggaggtgcccagggacaagctggtgttaggacgcactcttggc
tctggtgccttcggacgggtggtggaggcaacagcccatggcctgagccactcacagtcc
agcatgaaagtggcagtcaaaatgctcaagtccaccgcccggagcagcgagaagcaagcc
cttatgtctgagctgaagatcatgagccacctgggacctcacctcaacattgtcaacttg
ctgggggcctgcaccaaaggaggtcccatctacatcatcaccgaatactgccgctatggg
gacctggtggactacctgcaccgcaacaagcacacctttctgcagtcctatggtgagaag
gctcggcgagaggcagagctctacgggaacaccgccaaggaggaccacgtgcagagtcac
ctctccttgtctgttgagagcgatgggggctacatggacatgagcaaggacgactccctg
gattacgtgcccatgtctgacatgaagggtgaagtcaagtatgctgacatcgagtcctct
aactatggcaccccttatgagctggacagctattccccatcagctcccgaaaggacagac
cgggtgacgctgataaacgagtctccactcctcagctacatggacttggtgggcttcagc
ttccaggtggccaatgggatggagttcctggcttccaaaaattgtgtgcatcgtgacctg
gctgccaggaacgtcctcatctgtgaggggaagctggtgaagatctgtgactttggcctg
gcaagggacatcatgagggattccaattacatctccaaaggcagcaccttcttgcccctt
aagtggatggctccagagagcatcttcaacaacctctacaccaccctgagcgatgtgtgg
tccttcgggattctcctctgggagatattcactctaggggggactccatacccggaactg
cctatgaacgaacagttctacaacgccatcaaacgtggctatcggatgtccaaacccacc
catgcctctgatgaaatctacgatatcatgcagaagtgctgggaggaaaagtttgagatc
agaccatccttctcacagctggtggtgcttatgggaaaccttttggtggattgctacaga
aagaggtaccagcaggtggatgaagagttcatgaagagtgaccaccccgcagttgtccgc
acaagacccgtaatccccgggctgaacaacgccaggctcgctgccagcagcatcctctac
acagccgtgcaccagaacgggggcgagaatgattatatcatccctcttcccgaccctaaa
cccgaggcaatctgtgatctccctcaggaggcctccatcagccgggccagctcgatgctc
aacgaggccaacacatcgtctacaatatcctgtgacagccctctgggcctccggcaggac
gaggagcaggaatcagacacacagcccagctgccaggagccggccacggggcaccaagag
gtggaggagagtttcctgtag

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