KEGG   Apaloderma vittatum (bar-tailed trogon): 104277206
Entry
104277206         CDS       T08559                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104277206 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:avit03041]
    104277206 (SMNDC1)
Spliceosome [BR:avit03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104277206 (SMNDC1)
 Complex B
    104277206 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    104277206 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 104277206
NCBI-ProteinID: XP_009872083
UniProt: A0A091NPH0
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNAENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagacctcgctaagcagttagctagctacaaagctcagcttcagcaagttgag
gctgccttatctgggaatgcggaaaatgaagatttactaaaactgaagaaagatttacag
gaagtcatagaattaaccaaagatctcctttcaacacaaccttcagaaactcttgcaagt
tctgacagttctgcttctgctctgcccagtcactcctggaaggttggggataggtgtatg
gcaatatggagtgaggatggacagtgttacgaagctgagatcgaagagatagatgaggag
aacggaacagctgccatcacatttgctggatatggcaacgctgaagtgacacctctgttc
aacctcaagcctgtggaagagggaagaaaagcaaaagaggacagtggcaacaaacccatg
tccaagaaagagatgatagcccagcaacgagagtataaaaagaagaaagcattgaaaaaa
gcacagagaattaaagaacttgaacaggaacgagaggaccagaaagtcaagtggcaacag
ttcaacaacagagcctattctaaaaacaagaaaggccaggtaaagaggagtatttttgct
tcccccgagagcgtaactggcaaggttggagttggaacatgtggaattgcagacaaacct
atgacacagtatcaagatacctctaaatacaatgtcaggcatttgatgcctcagtaa

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