Apaloderma vittatum (bar-tailed trogon): 104277536
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Entry
104277536 CDS
T08559
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04620
Toll-like receptor signaling pathway
avit04621
NOD-like receptor signaling pathway
avit04622
RIG-I-like receptor signaling pathway
avit05164
Influenza A
avit05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104277536 (TRAF3)
04621 NOD-like receptor signaling pathway
104277536 (TRAF3)
04622 RIG-I-like receptor signaling pathway
104277536 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104277536 (TRAF3)
05168 Herpes simplex virus 1 infection
104277536 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
ATG16
Sina_ZnF
zf-C3HC4_2
FliJ
CEP104_ZnF
Spc29
Tropomyosin
zf-RING_UBOX
KxDL
zf-RING_6
DUF1664
Crescentin
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
104277536
NCBI-ProteinID:
XP_009872497
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDTSKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELLCPRADCKEKILRKDLPDHVETTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggataccagtaagaaaacagaaccccctttatctgtagaaatggtacaacaaagggcc
aatcctgatcgcagtccttcagcatcaatctatgttccggagcaaggtggctacaaagag
aaatttgtaaatgctgtggaagataagtataaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacagattctgtgagacctgcatgaatgccttgctg
agttcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcaaatatactgcagaaatgaaaac
aagggctgtaaagaacaactatctttgggtcaattactgatgcatttgaaaaccgattgt
cagtttgaagaactcttgtgtcctcgtgctgattgcaaagagaaaatactgagaaaagat
ttgccagaccatgtagagacgacctgtaaataccgggagacaacctgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagattgcccgtgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagaaaaactgaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaagctgacagcatgaagagcagtgtagaatccctccagaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcgaaatacaagcctgctg
gagacacagctgagccgacacgatcagatgctgagtgttcatgatatccgtctggctgac
atggacctccgattccaagtgttggaaactgccagctacaacggagtattaatttggaaa
attcgagattataaacgtcggaagcaagaggcagtcatggggaagactctgtccttgtac
agccagcccttttatactggatactttggctacaagatgtgtgccagagtttacctaaat
ggagatggcatgggaaaggggacgcacttgtcgctgttttttgtcataatgcgtggagaa
tacgatgcattgcttccttggccctttaagcagaaagtgactctaatgctaatggatcaa
ggaccgtctcgccgccacttaggagatgctttcaagccagacccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcgtctggctgcccagtctttgtggctcaaact
gtcctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acgtcggatctaccagacccctga
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