Apaloderma vittatum (bar-tailed trogon): 104279378
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Entry
104279378 CDS
T08559
Symbol
NR1H4
Name
(RefSeq) bile acid receptor
KO
K08537
farnesoid X receptor
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avit03000
]
104279378 (NR1H4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
avit03310
]
104279378 (NR1H4)
Transcription factors [BR:
avit03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104279378 (NR1H4)
Nuclear receptors [BR:
avit03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
104279378 (NR1H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104279378
NCBI-ProteinID:
XP_009874948
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MGSEMNLIGHHQLATADGFSLAEGPHLFGVLSEPMSSPAQEADVSPYPQYNSVPFPQVQP
QISSPPYYSNLGFYPPQHEEWYSPGMYELRRIPSETLFTRESEIMDIPAAKKPRLGHSTG
RVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCEMDMYMRRKC
QECRLRKCKQMGMLAECLLTEIQCKSKRLRKNVKQPPDQTLNEDNEGHDMKQVTSTTKIY
REKVEFTPEQQNLLDYIMDSYSKQQIPQEVSKKLLHEEFSAEGNFLILTEMATSHVQVLV
EFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFSRKLPTGHTVLLEERIRNSGISD
EFITPMFNFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDRESVERLQEPLLDILQKFC
KLHHPDNPQHFACLLGRLTELRTFNHQHAEMLMSWRVNDHKFTPLLCEIWDVQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggatctgaaatgaatttaataggacatcaccagctagctactgctgatggattttct
cttgctgaaggtcctcatttgtttggtgtcctttcagagccaatgagttctccagcgcaa
gaggcagatgtgtcaccttacccgcagtacaacagtgtgccttttccccaagtccagcct
cagatttcatcgccgccttattactccaacctaggcttctaccctccgcagcatgaggaa
tggtattcccctgggatgtatgagctcaggagaataccctcagagaccttgttcacaagg
gagtcagagataatggatatccctgcagctaaaaagcctagactgggtcactccacggga
agagtgaaaggagaagagctctgtgtggtttgcggtgacaaagcctctgggtaccactac
aatgctcttacttgtgaaggatgcaaagggttcttcagaagaagcatcacaaaaaatgca
gtatacaagtgtaaaaatggaggcaactgcgagatggacatgtacatgaggaggaaatgt
caggagtgccgcctaaggaaatgcaagcaaatgggcatgttggctgaatgtctgttaaca
gaaattcaatgcaagtctaaaaggctacggaaaaatgtgaaacagcccccagatcagaca
ctaaatgaagataacgaaggccatgacatgaaacaagtgacatctacaactaaaatatat
agggagaaagtagaatttaccccagaacagcagaaccttcttgattacatcatggattca
tacagtaaacaacaaataccacaggaggtgtcaaaaaaactattgcacgaggaattcagt
gctgaaggaaattttctgattttaacagaaatggctaccagtcatgtgcaggttcttgtg
gagttcactaaaaaactaccaggcttccaaactcttgatcatgaagaccagattgctttg
ctgaagggctcagcagtagaagccatgttcctccgttcggctgagatcttcagtaggaaa
cttcctacgggtcatactgtccttttagaagaaagaattcgcaatagtggtatctcagat
gaatttataactcccatgtttaatttttataaaagcattggagagctgaagatgacacag
gaagaatatgcgctgctcacagccatagttatcctgtctccagatcgacaatacataaag
gacagagagtccgtggagaggcttcaagaacccctgctggatattctacaaaagttctgc
aaacttcaccacccagataaccctcaacactttgcatgtcttttgggccgtcttacagaa
ttacggacatttaaccatcaacacgcagagatgctgatgtcatggagagtgaacgatcac
aaattcacacctcttctctgtgagatctgggatgtgcagtga
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