Apaloderma vittatum (bar-tailed trogon): 104280226
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Entry
104280226 CDS
T08559
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit00514
Other types of O-glycan biosynthesis
avit04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104280226 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104280226 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
avit01003
]
104280226 (LFNG)
Enzymes [BR:
avit01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
104280226 (LFNG)
Glycosyltransferases [BR:
avit01003
]
Glycan extension
O-Glycan
104280226 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
104280226
NCBI-ProteinID:
XP_009876106
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
TFIFTDGEDEELKKQARNVINTNCSAAHSRQALSCKMAVEYDKFIESGRKWFCHVDDDNY
VNVRTLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWFATGGAGFCISRG
LALKMSPWASGGHFMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHSHLENLHQVPKT
EIHKQVTLSYGMFENKRNSIHMKGAFSVEEDPSRFRSVHCLLYPDTPWCPANVVY
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
accttcatcttcacagatggggaggatgaggagctgaagaagcaagcacgaaatgtcatc
aacaccaactgctcggctgcccacagccgccaggccctgtcctgcaagatggccgtggag
tacgacaagttcatcgagtctggcagaaagtggttctgccacgtggacgatgacaactat
gtgaatgttcggacactggtgaagctgctctccagctacccccacacgcaggacatctac
attgggaagcccagtctggaccggcccatccaggccacggagaggatcagcgagaacaag
atgcaccctgtgcatttctggtttgccacgggcggagcagggttttgtatcagccggggg
ctggcgctgaagatgagcccgtgggccagcgggggccacttcatgagcaccgcagagaag
atccgcctgcctgacgactgcaccatcggctacatcatcgagtctgtgctgggggtgaag
ctcatccggagcaacctcttccactcacacctggagaacctccaccaggtgcccaagacg
gagatccacaaacaggtgacgctaagctacggcatgttcgagaacaagcgcaactccatc
cacatgaagggagccttctccgtcgaggaggacccatccaggtttcgctccgtgcactgc
ctgctgtaccccgacacgccatggtgccctgccaatgtggtttactag
DBGET
integrated database retrieval system
