Apaloderma vittatum (bar-tailed trogon): 104281075
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Entry
104281075 CDS
T08559
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104281075 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avit03400
]
104281075 (TDG)
Enzymes [BR:
avit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
104281075 (TDG)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104281075 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
104281075
NCBI-ProteinID:
XP_009877240
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
YYAYLQQAQAFYTFPFHQMMTAAPNMEIMTEQPTLEGIPEPNIAQEPPKEVKKGGRKRKA
KVTEPKPPKKPAAKKEKSAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTF
DLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFT
NMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEVFGIKVKNL
EFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIAPNTEVQE
VQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPYESEHCNFSSNGTAAGDPQ
YCEGSSFGEVPNGQWLAPSFAEQIPAFSGGVAREEEGGSA
NT seq
1204 nt
NT seq
+upstream
nt +downstream
nt
atactacgcgtatcttcagcaagctcaagctttttacacgtttccgttccatcagatgat
gacagcggcacctaacatggaaattatgactgagcagccaactctagagggcattccaga
gccgaacattgctcaggagcctccaaaagaagttaaaaagggaggaaggaaaagaaaagc
caaagtgactgagccaaagccaccgaaaaagcctgctgctaaaaaagaaaaatcagccaa
gtcaaaaggcaaacaggaaaagatcacagacacttttaaagtcaaaagaaaagtggaccg
ttttaatggcgtatctgaagctgaacttctgaccaagactttacctgacattttgacctt
cgatctggacattgtgataattggcataaaccctggcttgatggcagcttacaaaggaca
tcattaccctggacctggaaaccatttttggaagtgtctgttcatgtctggtctaagtaa
tgaacagctgaaccacatggatgaccacaccttgccacataaatatgggattggatttac
aaatatggttgaaaggacaacacctggaagcaaagacctctccagcaaagagtttcggga
aggagggcgaattctgatgcagaagttacagaagtataaacctcgtatagcagctttcaa
tggaaaatgtatttatgaaatttttagtaaagaagtttttggaataaaagttaagaactt
ggaatttggactacaaccacacaaggtgcctgatacagaaactctctgctatgttatgcc
atcgtccagtgcaagatgtgctcagtttcctcgtgcacaagataaagttcattattatat
aaagctgaaagacttaagagatcagctgaaaggcatcgcaccaaacacagaggtgcagga
ggtgcagtacacatttgacttgcaacttgcacaagaggatgctaagaagatggctgtaaa
agaagaaaagtacgacccgggttacgaagcggcatacggaggcgcgtactgcgatcgtgc
gccgtatgaaagcgaacactgcaatttctcttcaaacggaaccgcagcgggtgatccgca
gtactgcgagggctcgtccttcggtgaagttcccaatggacagtggctggcgccgtcctt
tgcagagcagattccagcgttcagcggtggcgtcgcgcgggaggaagagggaggcagcgc
gtaa
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