Archangium violaceum: JQX13_52255
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Entry
JQX13_52255 CDS
T07137
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
avm
Archangium violaceum
Pathway
avm00270
Cysteine and methionine metabolism
avm00450
Selenocompound metabolism
avm00670
One carbon pool by folate
avm01100
Metabolic pathways
avm01110
Biosynthesis of secondary metabolites
avm01230
Biosynthesis of amino acids
avm04980
Cobalamin transport and metabolism
avm04981
Folate transport and metabolism
Module
avm_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JQX13_52255 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JQX13_52255 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JQX13_52255 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JQX13_52255 (metH)
04980 Cobalamin transport and metabolism
JQX13_52255 (metH)
Enzymes [BR:
avm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
JQX13_52255 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Met_synt_B12
Pterin_bind
B12-binding
B12-binding_2
CdhD
Motif
Other DBs
NCBI-ProteinID:
QRK08399
LinkDB
All DBs
Position
complement(12378157..12381669)
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AA seq
1170 aa
AA seq
DB search
MSSHLPTPLPLPPGEHGRRVEALRAAMRERVLVLDGAMGTLLQQKNLKAADFGGAEYEGC
NEHLVLTRPDVIKSIHETYLASGADVTETDSFGGTPLVLGEFGLSHKAVEINVAASKLAL
EAALEAEARDGRMRWVAGSIGPTTKAISVTGGITFEELVHNFAVQAEALALGGSDYLLLE
TCQDTRNVKAALLGCERAFVKLGWKLPVAVSGTIEPMGTMLAGQSVEALAVSLEHVELLY
LGLNCATGPEFMTDHIRSLASMSPFAVSCVPNAGLPDENGHYLETPEMLARSLRRFCEQG
WLNVVGGCCGTHTGHVRAIADAVKGLEPRRDVPPPRSTLSGVDFLEVRDEERPVIVGERT
NVIGSKKFKELIVAGQLEDASEIARAQVKRGAQVIDVCLANPDRDELEDMRNFLEVVVKK
VRVPLMIDSTDERVIAMALTYSQGKAIINSVNLEDGEERFEKVVPLARQYGAALVVGCID
EKGMAVTRQRKLEVAERSFELLTGKYGMKAEDLYFDPLVFPCASGDAQYTGSAVETIEGV
RLIKQRFPQCRTVLGISNVSFGLPTAGREVLNSVFLYHCVQAGLDMALVNSEKLERYPSL
PQEERQLSEDLLYNRGTDPVTPFAAHFRERKPKKADVSTLPLEERLQRYIIEGSRDGLHA
DLELAMEKYAPLEIINGPLMKGMDEVGRLFGANELIVAEVLQSAEAMKAAVSYLEPRMSK
AQAASRGKIVLATVKGDVHDIGKNLVEIILANNGFQVVNLGIKVPPEQLVMAVREHGPDI
VGLSGLLVKSAHQMVATAEDLKRQGVDVPILVGGAALSRNFVDRNIAPAYGGTVAYAQDA
MSGLELAKQLVDPAAHEKLKGELAERRTKLAQQDKDRPKPGAPVAAARSPEVSILEQVPP
APDYTRHVLANTPLDTIWRFVNPVMLYGRHLGLRTASRALGTPAEAELAKTEEGRKALAL
KEQVESIKGELRGGRMQARAVFQFFKVGSEGNRIHLFDGESGRPVVVFDLPRQEKAGGLC
LADFVKPLENGEPRDNMAMFVVTAGQGIRELSEEFKAKGEFLKMHAVQALALETAEAYAE
MLHTQLRSMWGFPDKPDMTMLERFRAEYQGKRYSFGYPACPRLEDQTLLFQALRPEDIGV
QLTDGCMMEPEASVSALVFHHPQAHYFAVT
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaccttcccacccctcttcctcttcctccgggtgagcatggccgccgcgtg
gaggccctgcgggccgcgatgcgcgagcgcgtgctggtgctggacggggccatgggcacg
ctgctgcagcagaagaacctcaaggcggcggacttcggcggggccgagtacgagggctgc
aacgagcacctcgtcctcacgcggccggacgtcatcaagagcatccacgagacgtacctc
gcctcgggcgcggacgtgacggagacggacagcttcggcggcacgccgctggtgctgggc
gagttcggcctgtcgcacaaggcggtggagatcaacgtcgcggcgtcgaagctggcgctc
gaggcggcgctggaggccgaggcccgggatgggcggatgcgctgggtggcgggctccatc
ggccccaccacgaaggccatcagcgtgacgggtggcatcaccttcgaggagctggtgcac
aacttcgccgtgcaggcggaggcgctggcgctgggcggctcggactacctgttgctcgag
acgtgccaggacacgcgcaacgtgaaggcggcgctgctcgggtgcgagcgggccttcgtc
aagctggggtggaagctgccggtggcggtatccggcaccatcgagcccatgggcaccatg
ctggcgggccagtccgtggaggcgctggcggtgtcgctggagcacgtggagctgctgtac
ctgggcctcaactgcgccacgggccccgagttcatgacggaccacatccgctccctggcc
tccatgagccccttcgcggtgtcgtgcgtgcccaacgcgggcctgcccgacgagaacggg
cactacctggagacgcccgagatgctggcgcgctcgctgcgccgcttctgtgagcagggc
tggctcaacgtggtggggggctgttgtggcacgcacacgggccacgtgcgcgccatcgcc
gacgcggtgaagggcctcgagccccgccgcgacgtgccgccgccgcgctccacgctctcc
ggagtggacttcctggaggtgcgcgacgaggagcgcccggtcatcgtcggcgagcgcacc
aacgtcatcggcagcaagaagttcaaggagctcatcgtcgcgggccagctcgaggacgcg
tcggagatcgcccgggcccaggtgaagcgcggggcgcaggtcatcgacgtctgcctggcc
aacccggaccgggacgagctcgaggacatgcgcaacttcctggaggtggtcgtcaagaag
gtgcgcgtgcccttgatgatcgactccacggacgagcgcgtcatcgcgatggcgctcacg
tactcgcagggcaaggccatcatcaactcggtgaacctggaggatggcgaggagcgcttc
gagaaggtggtgccgctggcgcgccagtacggcgcggcgctggtggtgggctgcatcgac
gagaagggcatggccgtcacccgtcagcgcaagctggaggtggccgagcgctccttcgag
ctgctcaccggcaagtacgggatgaaggcggaggacctgtacttcgatccgctcgtgttc
ccgtgcgcctcgggtgatgcgcagtacacgggcagcgcggtggagaccatcgagggcgtg
cgcctcatcaagcagcgcttcccccagtgcaggacggtgctgggcatctccaacgtgtcc
ttcggcctgcccaccgcgggccgcgaggtgctcaactcggtgttcctctaccactgcgtc
caggcgggcctggacatggcgctcgtcaactcggagaagctcgagcgctacccgtcgctg
ccgcaggaggagcgccagctgtccgaggacctgctctacaaccggggtacggatccggtg
acgcccttcgccgcgcacttccgagagcgcaagccgaagaaggcggacgtgagcacgctg
ccgctcgaggagcgcctgcagcgctacatcatcgagggcagccgcgacggcctgcacgcg
gacctggagctggcgatggagaagtacgcgccgttggagatcatcaacggcccgctgatg
aagggcatggacgaggtgggccggctcttcggcgccaacgagctcatcgtcgcggaggtg
ctccagagcgccgaggcgatgaaggccgcggtgagctacctggagccgaggatgagcaag
gcccaggcggcctcgcgcgggaagatcgtgctcgccacggtgaagggcgacgtgcacgac
atcggcaagaacctggtggagatcatcctcgccaacaacggcttccaggtggtgaacctg
ggcatcaaggtgccgcccgagcagctcgtgatggcggtgcgcgagcacggcccggacatc
gtcggactgagcggcctgctggtgaagagcgcgcaccagatggtggccacggcggaggac
ctgaagcgccagggcgtggacgtgcccatcctggtgggtggtgccgcgctgagccgcaac
ttcgtggaccgcaacatcgctccggcctacggcggcacggtggcgtacgcgcaggacgcg
atgagcggcctggagctggccaagcagctcgtcgacccggccgcgcacgagaagctcaag
ggcgagctggccgagcgccgcacgaagctggcgcagcaggacaaggatcggcccaagcct
ggtgccccggtggcggcggcgcgcagccccgaggtgtccatcctggagcaggtgcctccg
gcgccggactacacgcgccacgtgctggcgaacacgccgctggacaccatctggcgcttc
gtgaacccggtgatgctctacgggcggcacctgggcctgcgcacggcgtctcgcgcgctg
ggcactcccgccgaggcggagctggcgaagacggaggagggccgcaaggcgctcgcgctc
aaggagcaggtggagtccatcaagggcgagctgcgcggcgggcgcatgcaggccagggcc
gtgttccagttcttcaaggtgggcagcgagggcaaccgcatccacctcttcgacggggag
tcgggccggcccgtcgtggtgttcgatctgccgcgtcaggagaaggcgggcggactgtgc
ctggccgacttcgtgaagccgctggagaacggcgagccgcgcgacaacatggccatgttc
gtggtgacggcggggcagggcatccgcgagctgagcgaggagttcaaggcgaagggcgag
ttcctgaagatgcatgcggtgcaggcgctcgcgctcgagacggccgaggcctacgcggag
atgctgcacacccagctgcgcagcatgtggggcttcccggacaagcccgacatgacgatg
ctcgagcgcttccgcgccgagtaccagggcaagcgctactcgttcggctacccggcgtgc
ccccggctggaggatcagacgctgctgttccaggcccttcgccccgaggacatcggcgtg
cagctcaccgacggctgcatgatggagccggaggccagcgtgtccgcgctcgtcttccac
cacccgcaggcgcactacttcgcggtgacctga
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