Azotobacter vinelandii DJ: Avin_13320
Help
Entry
Avin_13320 CDS
T00885
Symbol
lpxC
Name
(GenBank) UDP-3-0-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
avn
Azotobacter vinelandii DJ
Pathway
avn00540
Lipopolysaccharide biosynthesis
avn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Avin_13320 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
avn01005
]
Avin_13320 (lpxC)
Enzymes [BR:
avn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Avin_13320 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
avn01005
]
Lipid A
Avin_13320 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ACO77558
UniProt:
C1DQA6
LinkDB
All DBs
Position
1295894..1296805
Genome browser
AA seq
303 aa
AA seq
DB search
MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFRRIDLDPVVDIPARAENVGET
TMSTTLVKGDVKVDTVEHLLSAMAGLGIDNAYVELSAPEVPIMDGSAGPFVFLIQSAGLQ
EQEACKRFIRIKREVAVEEDDKRAVFLPFDGFKVSFEIDFDHPVFRGRTQTASIDFSSTS
FVKEVSRARTFGFMRDIEFLRSHNLALGGSVDNAIVVDENRVLNEDGLRYEDEFVKHKIL
DAIGDLYLLGNSLIGEFRGFKSGHALNNRLLRALLEQKDAWEVVTFEDAMSAPISYVRPI
AAV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaacgcaccctgaagaacattattcgtgccacgggagtgggtttgcactcg
ggggagaaggtttatctgaccttgaaacccgctcctgtcgacacggggatcgtgtttcgg
cgcatcgatctcgatccggtagtggatatccccgcaagggctgaaaacgtcggtgaaacc
accatgtccacgacgctggtcaagggtgatgtcaaggtcgacacggtggagcacctgctt
tcggccatggccggtcttgggatcgataatgcttacgtcgaactctccgcccccgaagtg
ccgatcatggatggcagtgccggtcctttcgtctttcttatccagtccgcaggtttgcag
gaacaggaggcttgcaagaggttcatccgcatcaagcgtgaagtggccgtggaggaagat
gacaagcgtgccgtcttcctgcccttcgatggcttcaaggtgagcttcgaaatcgatttc
gatcatcctgtgttccgcggccgtacgcagaccgccagtatcgatttctccagtacttcg
ttcgtcaaggaggtcagtcgtgcacgaaccttcggtttcatgcgcgatatcgagtttctg
cgctcgcacaacctcgcgctaggtggcagcgtggataacgccatcgtggtcgacgaaaac
cgggtattgaacgaggatggtctgcgctatgaggacgagttcgtcaagcacaagattctc
gatgccatcggcgacctctacctgctgggcaacagcctgatcggcgaattccgcggcttc
aagtcggggcacgctttgaacaaccgcttgctgcgcgctctgctcgaacagaaggatgct
tgggaagtggtcaccttcgaagacgccatgagtgctcccatctcctacgtgcgtcccata
gcggctgtctga
DBGET
integrated database retrieval system
