Agrobacterium vaccinii: HRR99_12710
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Entry
HRR99_12710 CDS
T08171
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
avq
Agrobacterium vaccinii
Pathway
avq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HRR99_12710 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avq03400
]
HRR99_12710 (nth)
Enzymes [BR:
avq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HRR99_12710 (nth)
DNA repair and recombination proteins [BR:
avq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HRR99_12710 (nth)
Prokaryotic type
HRR99_12710 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UHS62322
LinkDB
All DBs
Position
circular:2584389..2585159
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AA seq
256 aa
AA seq
DB search
MTIAKKRSSTQTPKKSNSTARRKPAKVKTLYSHDELVEIFRRFSIQRPEPKGELEHSNPF
TLVVAVALSAQATDVGVNRATRGLFAVADTPQKMLDLGEERLISYIKTIGLYRNKAKNVI
ALSQMLIDQFGGEVPRTREELVMLPGVGRKTANVVMSMAFGVPTLAVDTHVFRIANRLCL
APGKTPDEVEERLVRIIPDKYLFHAHHWLILHGRYCCKARKPECERCVIADICKAPEKTC
DIPASLVELPAQLVAE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgacaatagccaagaaacgatccagcacccaaacgccgaaaaagtcaaattccacggca
cgccgcaagcccgcgaaggtcaagacgctctattcgcatgatgagctggtcgagattttc
cgtcgcttttccattcagcggcccgagcccaagggcgaactggaacactccaacccgttc
actctggtggtggccgtggcgctttctgcgcaggcgaccgatgtgggtgtgaaccgggcg
acacgcggcctgtttgcggtggccgatacaccgcaaaagatgctcgatctgggtgaggaa
cggctgatcagctacatcaagaccatcggtctctaccgcaacaaggccaagaacgtcatt
gcgctgtcgcagatgctgatcgaccagtttggtggcgaggttccgcgcactcgcgaggag
ctggtgatgctgccgggcgtggggcgcaagaccgccaatgtggtgatgtcgatggctttt
ggggtgccgacattggctgtcgacacgcatgtgtttcgcatcgccaaccggctctgtctg
gcgccgggcaagaccccggacgaggtggaagagcggctggtgaggatcattcccgacaaa
tatctgttccacgcgcatcactggctgatcctgcacgggcgctactgttgcaaggcgcgc
aagccggaatgcgagcgctgcgtgattgccgatatctgcaaggcgccggaaaagacctgc
gatattcccgcatccctggtggagttaccggcccagctggttgctgaatga
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