Agrobacterium vaccinii: HRR99_13190
Help
Entry
HRR99_13190 CDS
T08171
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
avq
Agrobacterium vaccinii
Pathway
avq01501
beta-Lactam resistance
avq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HRR99_13190
01503 Cationic antimicrobial peptide (CAMP) resistance
HRR99_13190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avq03036
]
HRR99_13190
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_13190
01504 Antimicrobial resistance genes [BR:
avq01504
]
HRR99_13190
Chromosome and associated proteins [BR:
avq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HRR99_13190
Transporters [BR:
avq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HRR99_13190
Antimicrobial resistance genes [BR:
avq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HRR99_13190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
HH_AAEA_pHBA
HH_EMRA
BSH_CusB
OEP
THOC7
Beta-barrel_RND_2
Biotin_lipoyl
HH_YBHG
BSH_YknX
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
UHS62406
LinkDB
All DBs
Position
circular:2692225..2693433
Genome browser
AA seq
402 aa
AA seq
DB search
MKRRFHPLLTSLLMAGVLAGCSDSGENKQAPAQASQRPPSPVSVVSLKKSEYPLTTVLPG
RASAFQTADIRPRVGGVIKQIAFKEGSFVKSGDLLYKIDDDTYQASFAEAQAALERAEVS
VPAAETNLQRYERLANSGASQKEFEDARTTLLQAKASVAEARATLQTAQINLSLTEVRAP
FDGVTSATNFSIGNVVTASQADSLMTLRKINPIYIQLNESSVNLLRLQAAIKTGKLERSD
NSETTDIRLKLEDGSEYPGVGKLDMSEMAVSTTTGTVSIRTLFDNPDNIILPGMYVRATI
TIGKEIGYLIPQRAAGRNASGELTAKFATAENKVETRTFPTSQLSGNNWLVTENVSDGDK
LIVDGFQGIANNAVVNPIPAEIDDKGFIIEKQSAQPAPAPKS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacgcttccacccgctcctcacatccttgctcatggcgggcgtcctggccgga
tgcagcgacagcggtgaaaacaagcaggcgccagcccaggccagccagcgtcccccgtct
cccgtcagcgtcgtttccctgaagaaaagtgaatatccgctgacaaccgttttgcctggc
cgtgcaagcgcgttccagacggctgatattcgtccccgcgtcggaggcgtgatcaagcag
atcgccttcaaggaaggcagcttcgtgaaatcaggcgatctgttgtacaagatcgatgac
gacacctatcaggcatcgtttgcagaagcgcaggccgccctggaacgagcagaggtcagc
gtgcccgctgcggaaaccaaccttcagcgctatgagcgtctggccaattccggcgcctcg
caaaaagaattcgaagacgcgcgcacgacactgctgcaggcgaaggcctccgtggccgag
gcccgcgcaaccttgcagacggcccagatcaatctgtccctcaccgaagtgcgtgcgccc
ttcgatggcgtgacatccgccaccaacttctcgatcggaaacgtggtcacggccagccag
gccgactcgttgatgacgctgcgcaagatcaatccgatctacattcagctcaacgaatcg
agcgtcaaccttcttcgtttgcaggctgcgatcaaaaccggaaaactggagcggagtgac
aatagcgaaacgacggatattcggctgaagctggaagacggctcggaataccctggtgtc
ggtaagctcgacatgtccgaaatggccgtcagcaccacgactggcaccgtttcgatccgc
accctcttcgataatcctgacaacatcatccttccgggcatgtatgttcgcgcaaccatc
acgatcggcaaggagatcggttacctcattccgcaacgcgcagcagggcgtaacgccagt
ggcgaactgaccgcgaaattcgcgacggcggaaaacaaggtggaaaccagaacatttccg
accagccagctctccggcaacaactggctcgtgaccgagaatgtgtctgatggcgacaag
ctgatcgtcgatggatttcaaggcattgccaacaacgctgtggtcaatcctatcccagcc
gagatcgacgacaagggattcataatagaaaagcagagcgcccagcccgctccggcgccg
aaatcatga
DBGET
integrated database retrieval system
