Avibacterium volantium: NCTC3438_00987
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Entry
NCTC3438_00987 CDS
T06626
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
avt
Avibacterium volantium
Pathway
avt00540
Lipopolysaccharide biosynthesis
avt01100
Metabolic pathways
Module
avt_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC3438_00987 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
avt01005
]
NCTC3438_00987 (lpxC)
Enzymes [BR:
avt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
NCTC3438_00987 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
avt01005
]
Lipid A
NCTC3438_00987 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Omp85
Motif
Other DBs
NCBI-ProteinID:
VEB23447
UniProt:
A0A3S4HT38
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All DBs
Position
1:993790..994725
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AA seq
311 aa
AA seq
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MDLENIMIKQRTLKQSIKVTGVGLHSGNKVTLTLRPAMANTGVIYCRTDLNPPVTFPANA
NAVRDTMLCTCLINEEGIRISTVEHLNAALAGLGIDNVIIEVDAPEIPIMDGSASPFIYL
LLDAGIEEQNAAKKFIRVKKPIRVEDGDKWAEFKPYNGFRLDFTIDFNHPAIGKDVRNYV
MDFSAQAFVQQISRARTFGFMKDIEYLQSQGLALGGSLDNAIVLDDYRILNEDGLRFKDE
LVRHKMLDAIGDLYMCGYNIIGDFKAYKSGHGLNNKLLRALLEDQEAWEFVTFEDKQQVP
QGYLAPNQVFI
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatttagaaaacattatgattaaacaaagaaccttaaaacagagtattaaagtaaca
ggtgtagggctacatagtggcaacaaagtaaccctaaccttacgcccagcaatggcaaat
actggagtgatttactgccgtacggatttaaacccaccggtaacgttccctgccaacgca
aatgccgtgcgtgatacaatgctttgtacttgtttgataaatgaagaaggcattcgtatt
tcgactgtagagcatttgaatgctgcgcttgcaggcttaggcattgataatgtgattatt
gaagtggacgcgccagaaattccaattatggacggcagtgcaagcccattcatttatctt
ttattagatgcaggcattgaagaacaaaatgcagcgaaaaaatttattcgcgtgaaaaag
ccaattcgtgtggaagacggtgataaatgggcagaatttaaaccttacaatggtttccgt
ttagatttcaccattgatttcaatcaccctgccattggtaaagatgtgcgtaattatgta
atggatttctccgcgcaagcgttcgtgcaacaaattagccgtgcaagaacctttggcttt
atgaaagatattgaatatttacaatcacaaggtttagcgttaggtggtagcctagataac
gctattgtgcttgatgattatcgcatcttaaatgaagatggtcttcgttttaaagatgag
ctagtacgccacaaaatgcttgatgctattggtgatttatatatgtgtggttataacatc
atcggtgatttcaaagcctataaatcagggcacggcttaaataacaaattattaagagcc
ttgcttgaagatcaagaggcgtgggagtttgttacctttgaagataaacagcaagtgcca
caaggttatctcgcgccaaatcaagtatttatctaa
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