Agrobacterium vitis VAT03-9: RvVAT039_03570
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Entry
RvVAT039_03570 CDS
T08809
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00300
Lysine biosynthesis
avv00550
Peptidoglycan biosynthesis
avv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RvVAT039_03570 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RvVAT039_03570 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avv01011
]
RvVAT039_03570 (murE)
Enzymes [BR:
avv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RvVAT039_03570 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
avv01011
]
Precursor biosynthesis
Amino acid ligase
RvVAT039_03570 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BCH63141
LinkDB
All DBs
Position
1:complement(364048..365508)
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AA seq
486 aa
AA seq
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MKLRDLASGDFGDLTGPLDGPVGDVEITGITADSRKVEPGMLFVALQGVKADGAGFVADA
VVRGAAAVLSGSHLDIAVPALVTDQPRHALALLAARLYPGQPETMVAVTGTAGKTSVASF
TRQIWAYAGLASAQIGTTGVISPTRSDYGSLTTPDPVALHQLLADLAQEGVTHAAMEASS
HGLDQSRLDGVRLAAAAFTNLGRDHMDYHPTVADYMAAKMRLFDTLLPKGSPAVIFADDE
WSAEAIRVARQAGHDVRTVGRAGDFLSLKRVEHFRHKQIAEIHHQGAIFEVDLPLAGDFQ
IANALVSAGLAISTGVEASVALKALEKLQGASGRLELVGQAKSGALAYVDYAHKPDALEK
VLTAVRPFTSGRIIVVFGCGGDRDKGKRPIMGEIADRLADIVIVTDDNPRSEVAATIRGE
VMAATPKGIEIGDRAQAIRAAVAMLATGDTLIVAGKGHEEGQIVGAQTLPFSDHAEIRKA
MEEFHP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcgagatctcgctagcggcgattttggggatctgaccggaccattggatggg
ccggtcggcgacgttgagatcaccggaataaccgccgacagccgcaaggttgaacccggc
atgctgttcgtggctttgcagggcgttaaggctgatggtgcgggtttcgttgccgatgcg
gtcgtgcggggcgctgctgccgtgctctccggttctcatctggatattgccgttccggct
ctggtcaccgaccagcctcgtcatgcgttagcgcttcttgccgcccgcctttatccgggc
caaccggaaaccatggtggcggtgaccggcacggctgggaaaacatcggttgcctccttc
acccgtcagatctgggcttatgccgggcttgccagtgcgcagattggcacgaccggggtg
atttccccaacccgtagcgattacggttcgctgaccacgcctgatccggtcgccttgcac
caattgctggcagatcttgcgcaagagggcgtgacccacgccgccatggaagcctccagt
cacggtcttgaccagagccggctggacggtgtgcgccttgccgctgccgcctttaccaat
cttggccgcgaccatatggattatcacccgaccgttgccgactacatggccgccaagatg
cggctgttcgacaccctgctgcccaaagggtctccggcggtgatctttgccgatgacgaa
tggtcggcggaagcaatccgggtggcaaggcaggcgggtcatgatgtccgcaccgttggc
cgggccggggatttcctcagcctgaaacgggtcgagcatttccgccacaagcagattgct
gaaattcatcatcagggtgcgatctttgaggttgatttgccgctggcaggggatttccag
attgccaatgcgttggtgtccgccggtcttgccatttcgaccggcgtcgaggcttcggtc
gccctgaaagcactggaaaagctgcaaggcgcttcgggccgcctggagctggtggggcag
gcgaaaagcggcgcgctcgcctatgtcgattacgctcacaagccggatgcgctggaaaag
gtgctgacggcggtcaggccctttaccagcggcagaattatcgtggtgtttggctgcggt
ggcgaccgcgataagggcaaacgcccgatcatgggcgagatcgccgaccgattggccgat
atcgtcatcgtcaccgatgataatccacgctcggaagtggctgccaccattcgcggtgag
gtgatggcagcgacaccgaaaggcatcgagatcggggaccgcgcccaggcaattcgcgcc
gctgtggcaatgctggcgactggcgatacgctgattgttgcaggcaaaggccatgaagag
ggccagattgtcggcgcgcagacgctgccgttttccgatcacgccgaaatccgcaaagcc
atggaggagtttcacccttga
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