Agrobacterium vitis VAT03-9: RvVAT039_31940
Help
Entry
RvVAT039_31940 CDS
T08809
Symbol
ispDF
Name
(GenBank) bifunctional enzyme IspD/IspF
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00900
Terpenoid backbone biosynthesis
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RvVAT039_31940 (ispDF)
Enzymes [BR:
avv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RvVAT039_31940 (ispDF)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
RvVAT039_31940 (ispDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IspD
YgbB
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
BCH65978
UniProt:
A0AAN2BV39
LinkDB
All DBs
Position
1:complement(3447625..3448848)
Genome browser
AA seq
407 aa
AA seq
DB search
MVHIQADGARSTAVILVAAGRGERAGASSEGPKQYRRIGGKPVIVHSLLGFADLLPQATL
IVVIHPDDEALLANALAPYPQLAASLTLTHGGKTRQQSVLAGLKALRDQKPDYVLIHDAV
RPFFDQPMLQRIITRLDDGADAVLPAIPVTDTLKRGDEGARVVDTVARSGLFAAQTPQSF
HFAKILAAHEDAASAGREDFTDDAAIAEWAGLTVHLVEGSPDNVKLTVKRDLEMADARLS
HNALPDVRTGNGYDVHQLVPGDGVTLCGIFIAHDQALSGHSDADVALHALTDALLATCGA
GDIGDHFPPSDPQWRGAASRIFLEHAANIVREAGGTVMNADISLIAEAPKISPHRQIMRE
KLSEILGIALDRCSVKATTNEKIGFVGRGEGIAAIATATVVFQGKPQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatattcaagcggacggggcaaggtcaacagcggtgatattggtcgcggcaggc
cggggagagcgcgctggcgcctccagcgagggaccgaagcaatatcggcggatcggcgga
aagcctgttattgtccatagcctgctaggcttcgcagatcttctcccgcaggcgaccctg
atcgtcgtcattcatcccgatgacgaggccttgctggccaatgcccttgccccttaccca
cagctcgctgcctcgctgaccctcacccacggcggcaaaacccggcagcaatcggttctg
gctgggttaaaagccttgcgggatcaaaagccggattatgtgctgatccatgacgcggtc
cgcccgtttttcgatcagccaatgctgcaacggattatcacccggcttgacgacggtgcc
gatgccgtcttgcccgccatcccggtgaccgatacgcttaaacgtggcgatgagggtgcg
cgagtcgtcgatactgtggcgcgcagcggactttttgcagcacaaacaccgcagagcttc
cactttgccaaaatactggctgctcacgaagacgccgcaagcgctggacgagaggatttc
accgatgacgccgccatcgccgaatgggcgggactaactgtccatctggtggaaggctcg
cctgacaatgtaaaactgaccgtgaaacgggatcttgaaatggccgatgcccgcctctct
cataacgctttgcctgatgtgcgcaccggcaatggctatgatgtccaccaactggtgccg
ggcgatggcgtaacgctttgcggcattttcattgcccatgaccaggccttgagcggacat
tccgatgccgatgtcgccttgcacgccctgaccgatgcgctactggccacctgcggggct
ggcgatatcggcgaccacttcccgccatcagacccgcaatggcgcggtgccgcgtcgcgg
atcttcctggagcatgcagcaaacatcgtgcgcgaagcgggcggcacggtcatgaatgct
gacatctcactgattgcagaagcaccaaaaattagcccgcatcgccagatcatgcgcgaa
aaactctccgagattctcggcattgcgctggaccgctgctcggtcaaagccacgaccaac
gagaaaattggctttgtcggccggggcgaaggtattgcagccattgccacagcaactgtg
gtttttcagggaaagccacaatga
DBGET
integrated database retrieval system