Actinomyces weissii: JG540_03335
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Entry
JG540_03335 CDS
T07198
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
awe
Actinomyces weissii
Pathway
awe03030
DNA replication
awe03410
Base excision repair
awe03420
Nucleotide excision repair
awe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
awe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JG540_03335 (ligA)
03410 Base excision repair
JG540_03335 (ligA)
03420 Nucleotide excision repair
JG540_03335 (ligA)
03430 Mismatch repair
JG540_03335 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
awe03032
]
JG540_03335 (ligA)
03400 DNA repair and recombination proteins [BR:
awe03400
]
JG540_03335 (ligA)
Enzymes [BR:
awe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
JG540_03335 (ligA)
DNA replication proteins [BR:
awe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JG540_03335 (ligA)
DNA repair and recombination proteins [BR:
awe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
JG540_03335 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JG540_03335 (ligA)
MMR (mismatch excision repair)
DNA ligase
JG540_03335 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JG540_03335 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
DNA_pol_lambd_f
HHH_3
UPF0758_N
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
QQM67912
UniProt:
A0A7T7MAK9
LinkDB
All DBs
Position
820223..822907
Genome browser
AA seq
894 aa
AA seq
DB search
MTTALPDPEAPRKAPAAVSSPTRSSAPAAVSPEAPASPAAPASPEGKEAPAVPASPAAPA
SPEAPTTSRVPTTPTAPATSAEGAEQPTTPEPPAQVRARWWELATLVSQARRAYYEDLDS
QSPWSDAEYDAAYRELEELEAAYPTLAATSSPTRAVGGKRVQDFQEARHHERMYSLQDVF
SLEEVDEWAARVAQDTGVPDAEQPLTAEVKIDGLAVALTYENGVLTRAATRGNGDVGEDV
TANVRTISSVPHSLAGQDHPALVEVRGEVYFPTQDFMAFNEARRQENAARDARNAALEEA
TGTGRRARKEPLLQVFANPRNAAAGSLRQKDPKVTASRPLALIAHGVGAIIPAPGQDLPL
PQAQHGWYALLESWGLPVSPYNAVVRGPQERRDFIARYAEHRHDLVHEIDGIVFKVDSRE
QQAALGFTSRVPRWASAYKYPPEEVHTRLLDIDVQVGRTGRVTPFGIMEPVLVAGSTVSR
ATLHNATEVARKGVLIGDLVVLRKAGDVIPEIVGPVLQARDGSERRFEMPTSCPSCGTAL
APAKEGDVDLRCPNTRSCPAQLTERVAHIGSRGALDVEGLGDEAAAALTQPDAGRADAVA
ALAAGHALETERGRLRLKAKELEALHPSERVEAVEALLARHGLGPQAPVLTGEAALFDLR
AEDLREVQVWRPVSRRGQDTGDWRLLRFFWTKASYAPDGTVKKASAPGKNATAMLAQLEA
ARSQPLWRVLVALSVRHVGPTAARALAARFGSLAALRSAAPEELSQVEGVGPAIARSWVD
WREVDWHREILERWEAAGVRSADEQSAEPVAQVLAGLTVVVTGTLAGFTRDSAKEAIVSR
GGKAAGSVSRRTSVVVAGESAGSKETKARELGVPVLDEAGFLRLLEEGAAAIPS
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgctctgcccgacccagaggccccccgcaaggccccggccgccgtcagcagt
cccacacgctctagcgccccggccgccgtgtcccctgaggccccggcgtcacccgcagct
ccggcatcccccgagggtaaggaggccccggcagtcccggcgtcacccgcagccccggca
tcccccgaggcccctaccacctccagggtccctaccacccccacagcccctgccacctcc
gctgagggggctgagcagccgaccaccccagagccccccgcgcaggtacgggcgcgctgg
tgggagctcgctaccctggtctcccaggctcggcgcgcctactacgaggacctcgactcc
cagagcccctggtccgacgccgagtacgacgccgcctaccgggagctggaggagctggag
gcggcctaccccacgctggcggccacctcttcacccacccgggcggtcggtggcaagcgg
gtgcaggacttccaggaggcccgtcaccacgagcgcatgtactccctgcaggacgtcttc
agcctggaggaggttgacgagtgggcggcccgcgtcgcccaggacaccggggtcccggac
gctgagcagccgctgacggcggaggtcaagatcgacggcctcgcagtggccctgacctac
gagaacggcgtcctcacccgcgccgccacccgcggcaacggcgacgtcggggaggacgtc
acagccaacgtgcgcaccatctcctccgtaccccattccctggccgggcaggaccacccg
gccctggtggaggtacgcggcgaggtctacttccccacccaggacttcatggccttcaac
gaggcccgtcggcaggagaacgccgcccgggatgctcgcaacgccgccctggaggaggcc
accggcaccggcaggcgcgcccgcaaggagccgctgctgcaggtcttcgccaacccccgc
aacgccgccgcaggctccctgcgccagaaggaccccaaggtgaccgcctcccggcccctg
gccttgatcgcccatggggtgggggccatcatcccggccccggggcaggacctcccgctg
ccccaggcccagcacggctggtacgcgctgctggagagctggggcctgcctgtctccccg
tacaacgcggtggtgcgcgggccgcaggagcggcgggacttcatcgcccgctacgccgag
caccgccacgacctggtacacgagatcgacgggatcgtgttcaaggtggactcccgggag
cagcaggccgccctgggcttcacctcccgggtgccgcgctgggccagcgcctacaagtac
ccgcccgaggaggtccacacccggctgctggacattgacgtgcaggtggggcgtaccggg
cgcgtgacccccttcggcatcatggagccggtgctggtggcgggctccacggtctcgcgc
gccaccctgcacaacgccaccgaggtggctcgcaagggcgtgctcatcggcgacctggtg
gtgctgcgcaaggccggggacgtgatccctgagatcgtcggcccggtgctccaggcccgg
gacggctccgagcgccgtttcgagatgcccaccagctgcccctcctgcggcaccgcgctg
gccccggccaaggagggcgacgtggacctgcgctgccccaacacccgttcctgcccggcc
cagctcactgagcgggtggcccatatcggctcccggggcgccctggacgtggagggcctg
ggggacgaggccgcggcggccctcacccaacccgacgccgggcgcgccgacgccgtcgcc
gccctggccgctggccacgccctggagaccgagcgcggtaggctgcggctcaaggccaag
gagctggaggccctgcacccctccgagcgggtggaggccgtggaggccctgctggcacgg
cacgggctgggaccgcaggccccggtgcttacgggggaggccgccttgttcgacctgcgg
gcggaggacctgcgggaggtgcaggtgtggcggcccgtctcccgccggggccaggacacc
ggcgactggcgcctgctgcgcttcttctggaccaaggccagctatgccccggacggcacg
gtcaagaaggcctcggctcccggcaagaacgccacggccatgctcgcccagctggaggcg
gcccgtagccagcccctgtggcgggtgctggtggccttgtcggtgcgccatgtggggccg
acggcggcgcgcgccctggcagcccgtttcggttccttggcggcgctgcgctcagccgcg
ccggaggagctgtcccaggtggagggcgtgggtccggcgatcgcccgctcctgggtggac
tggcgggaggtggactggcaccgggagatcctggagcgctgggaggctgcgggcgtgcgc
agcgcggacgagcagtccgctgagcctgtggcccaggtgctggcggggctgaccgtggtg
gtgaccggcaccttggcgggcttcacccgggacagcgccaaggaggcgatcgtctcgcgg
ggcggcaaggccgcaggctccgtgtccaggcgcaccagcgtggtggtggcgggggagagc
gcgggctctaaggagaccaaggcccgcgagctgggggtgccggtgctggacgaggctggt
ttcctgcgcctgctggaggagggggcggcggccattccctcctga
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