Arcanobacterium wilhelmae: P8A24_06420
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Entry
P8A24_06420 CDS
T08983
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
awl
Arcanobacterium wilhelmae
Pathway
awl03030
DNA replication
awl03410
Base excision repair
awl03420
Nucleotide excision repair
awl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
awl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P8A24_06420 (ligA)
03410 Base excision repair
P8A24_06420 (ligA)
03420 Nucleotide excision repair
P8A24_06420 (ligA)
03430 Mismatch repair
P8A24_06420 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
awl03032
]
P8A24_06420 (ligA)
03400 DNA repair and recombination proteins [BR:
awl03400
]
P8A24_06420 (ligA)
Enzymes [BR:
awl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
P8A24_06420 (ligA)
DNA replication proteins [BR:
awl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
P8A24_06420 (ligA)
DNA repair and recombination proteins [BR:
awl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
P8A24_06420 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P8A24_06420 (ligA)
MMR (mismatch excision repair)
DNA ligase
P8A24_06420 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P8A24_06420 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
Nlig-Ia
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
WFN89831
LinkDB
All DBs
Position
complement(1429083..1431596)
Genome browser
AA seq
837 aa
AA seq
DB search
MEKNFDIAKARWEELAPIVKHAQDAYHSTGEPVMVDATYDSLIHEMRALEDQFPALWSPQ
SPTMRVGAKVARGGLPEIAHRERMYSLQDVFSREELRQWYESIAAELPAGSRFTAEVKID
GLALNLTYRRGMLETAATRGDGITGEDVTPNALAISVIPQRLEGDDHPELVEIRGEVYFP
VVAFEEYNSLVEARNEEITRRNEEIRAHNVQIRKENAARRREGLEPLPTLRTEPLLKEFV
NPRNAASGTLRQEDTTSFALRSLSFIAHGIGYLEGADKALTAKLATQEGVYEEFASWGVP
VSDQTAMVSSMEEIEAYLDKFQNARDSLDHQFDGVVIKLEDRTVQEALGFTTRVPRWAVA
FKFPPVEVQTRLLDIRVQVGRTGRVTPYAVMEPVWVDGSTVSQATLHNPTEVARKGVKIG
DMVILRKAGDIIPEVLGPIEALRDGSERDFVMPTHCPACGGEIRASKEGDADLRCQNTRS
CPAQLTQRIVHIGSRGGLDVEALGDETGLWLADPDRFRMDALIALATGHKVTLEGEYGQA
VNLKLSLAKRQELGIVDEDGAILNTESVIPAPVLESLGFPKPAVPVLETEAGLFDLTPAS
VENVWIWQPVKKSGEETGDWRYVRAAWTKPTWLKATVARPEPELKKPSEPSRTTLKVFDQ
LEVAKGKELWRKLVALNIRHVGPVAAKALAATFGSLQAIRDAGLEEVSSVDGVGEVIATS
FLSWFEEEWHQEIVDRWQASGVKFEDAPLSGQSQVPQTLAGMTLVATGSFEGYSRDSINE
AIEAHGGKATGSVSKKTTAVVVGEKAGSKETKAIELGVPTLTEEQFNRLLETGELPA
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagaattttgacattgccaaggcgcggtgggaagaactcgcaccgatcgtgaag
catgcccaggatgcgtatcactccaccggtgagccggtgatggtggatgccacgtatgat
tccctgattcatgagatgcgtgcgctcgaggatcagttcccagcgctgtggagcccacag
tcgccaacgatgcgtgttggagcgaaggtggcgcgtggcggcctgccggagatcgcgcac
cgtgagcggatgtattcattgcaagatgttttctctcgcgaggaattgcgccagtggtat
gagtcgattgcggcggagctccctgcaggttcacgtttcaccgcggaagtcaagatcgat
ggcctggcactgaacctcacctaccggcgtgggatgcttgaaactgcggccacacgcggc
gatggcatcacgggcgaggatgtcacgccgaatgcgctcgcgatttcagtgattccccag
cgccttgagggtgatgatcatccggagctggtggagatccgtggcgaggtgtattttccg
gtggttgcctttgaggaatacaactccctggtggaggcgcgcaacgaggagatcacccgc
cgtaacgaggagatccgggcacacaacgtgcagatccgaaaggaaaatgctgcccgacgt
cgggaagggctcgagccgcttcccacgctgcgtaccgagccgctcttgaaggagttcgtc
aacccgcgcaatgcggcctcgggcacgcttcgccaggaagataccacctcttttgctttg
cgttcgctgtcgttcatcgcgcacgggattggctatctcgagggagcggataaggcgctt
acagcgaagcttgctacgcaagagggtgtgtacgaggagtttgcctcgtggggtgtgccg
gtgtcggatcaaactgcgatggtctcgtcaatggaagaaatcgaagcgtacctggataaa
ttccaaaacgcgcgcgattcgcttgatcaccaattcgatggcgttgtgatcaaacttgaa
gatcgcaccgttcaggaggcgctcggtttcacgacgcgcgtaccgcgctgggcggtggcg
ttcaagttcccgccggtggaagtgcaaactcgcctgctggatatccgcgtgcaggtgggg
cgcaccgggcgcgtcacgccgtacgcggtgatggagccggtgtgggttgatggttccaca
gtgtcgcaggcaaccctccacaaccccacggaggtggcacgcaagggcgtgaagatcggc
gatatggtgattctgcgcaaggcaggggatattatcccggaggtcttgggcccgatcgag
gccttacgcgatggctcagagcgcgatttcgtgatgcccacgcactgtcctgcctgcggt
ggggaaattcgcgcctcgaaggagggtgatgccgatctgcgttgccaaaacacgcgttcg
tgcccggcccagcttactcagcgcatcgttcacattggctcgcgtggtggcttggatgtg
gaggccttgggcgatgaaacaggcctgtggctcgcagatccggatcgtttcaggatggat
gcgctcattgcgcttgccaccggtcacaaggtcacacttgaaggggagtacggccaagct
gtgaacctgaagttgtctcttgcgaagcgccaagagttgggtatcgtggatgaggatggc
gcaattttgaacaccgagtcggtcattcccgcccctgtgctggagtcgctgggattcccg
aagccggccgttccggtgttggaaactgaggcagggctctttgatctcactccagcgtcg
gtggagaacgtgtggatctggcagccggtgaagaagagcggtgaggaaacgggtgattgg
cgctatgtgcgcgccgcgtggacgaaacccacatggctcaaagcaacagtcgcgcgtccc
gagccggagttgaagaagccgagcgaaccgagccgaaccacactcaaggtttttgaccag
ctcgaggtggcgaaagggaaggaactgtggcgcaagctcgttgcgctcaatatccgccat
gtcggcccggttgctgcgaaggcgctcgcggctacgttcggctcacttcaggcgatccgc
gatgctggccttgaggaggtttcgagcgtcgatggtgtcggcgaggtgattgccacgtcg
ttcctgagctggttcgaggaggagtggcatcaagaaatcgttgatcgttggcaggcgtct
ggagtgaagttcgaagatgcgcccctgtcaggccaatctcaggtgccgcaaactctcgcc
ggcatgactctcgtggcaaccggctcgttcgagggctattcgcgcgattccatcaacgag
gcgattgaggctcatggaggaaaagctaccggttcggtctcaaagaagaccaccgccgtc
gtcgtcggcgaaaaagcagggtcgaaggaaactaaagcgatcgaacttggtgtgccgacg
ctcacggaggaacaattcaaccggctcctcgaaactggcgagttgccggcctaa
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